Agricultural soil and drilosphere as reservoirs of new and unusual assimilators of 2,4-dichlorophenol carbon

Consumers of 4-chloro-2-methylphenoxyacetic acid from agricultural soil and drilosphere harborcadA,r/sdpA, andtfdA-like gene encoding oxygenases

(2013) Ya-Jun Liu et al.   FEMS MICROBIOLOGY ECOLOGY

Novel [NiFe]- and [FeFe]-Hydrogenase Gene Transcripts Indicative of Active Facultative Aerobes and Obligate Anaerobes in Earthworm Gut Contents

(2011) Oliver Schmidt et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Removing Noise From Pyrosequenced Amplicons

(2011) Christopher Quince et al.   BMC BIOINFORMATICS

Alphaproteobacteria dominate active 2-methyl-4-chlorophenoxyacetic acid herbicide degraders in agricultural soil and drilosphere

(2011) Ya-Jun Liu et al.   ENVIRONMENTAL MICROBIOLOGY

Electron acceptor-dependent identification of key anaerobic toluene degraders at a tar-oil-contaminated aquifer by Pyro-SIP

(2011) Giovanni Pilloni et al.   FEMS MICROBIOLOGY ECOLOGY

Contrasting denitrifier communities relate to contrasting N2O emission patterns from acidic peat soils in arctic tundra

(2011) Katharina Palmer et al.   ISME Journal

Endogeic earthworms shape bacterial functional communities and affect organic matter mineralization in a tropical soil

(2011) Laetitia Bernard et al.   ISME Journal

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

JAGUC — A SOFTWARE PACKAGE FOR ENVIRONMENTAL DIVERSITY ANALYSES

(2011) MARKUS E. NEBEL et al.   Journal of Bioinformatics and Computational Biology

Novel aerobic benzene degrading microorganisms identified in three soils by stable isotope probing

(2010) Shuguang Xie et al.   BIODEGRADATION

Enhancement of chlorophenol sorption on soil by geophagous earthworms (Metaphire guillelmi)

(2010) Jun Shan et al.   CHEMOSPHERE

Formation and Fate of Bound Residues from Microbial Biomass during 2,4-D Degradation in Soil

(2010) Karolina M. Nowak et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

The earthworm Aporrectodea caliginosa stimulates abundance and activity of phenoxyalkanoic acid herbicide degraders

(2010) Ya-Jun Liu et al.   ISME Journal

Clostridiaceae and Enterobacteriaceae as active fermenters in earthworm gut content

(2010) Pia K Wüst et al.   ISME Journal

Relationship between bacterial diversity and function under biotic control: the soil pesticide degraders as a case study

(2010) Cécile Monard et al.   ISME Journal

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Update of the All-Species Living Tree Project based on 16S and 23S rRNA sequence analyses

(2010) Pablo Yarza et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Gut-Associated Denitrification and In Vivo Emission of Nitrous Oxide by the Earthworm Families Megascolecidae and Lumbricidae in New Zealand

(2009) P. K. Wust et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Phenol Degradation in the Strictly Anaerobic Iron-Reducing Bacterium Geobacter metallireducens GS-15

(2009) K. M. Schleinitz et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Abundance of Novel and Diverse tfdA-Like Genes, Encoding Putative Phenoxyalkanoic Acid Herbicide-Degrading Dioxygenases, in Soil

(2009) A. Zaprasis et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

In Situ Hydrogen and Nitrous Oxide as Indicators of Concomitant Fermentation and Denitrification in the Alimentary Canal of the Earthworm Lumbricus terrestris

(2009) P. K. Wust et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Comparison of DNA- and RNA-based bacterial community structures in soil exposed to 2,4-dichlorophenol

(2009) L. Lillis et al.   JOURNAL OF APPLIED MICROBIOLOGY

Effect of the Earthworms Lumbricus terrestris and Aporrectodea caliginosa on Bacterial Diversity in Soil

(2009) Taras Y. Nechitaylo et al.   MICROBIAL ECOLOGY

Earthworm assisted bioremediation of organic contaminants

(2008) Zachary A. Hickman et al.   ENVIRONMENT INTERNATIONAL

Response of bacteria to earthworm surface excreta

(2008) A. S. Oleynik et al.   MICROBIOLOGY

Organic carbon sequestration in earthworm burrows

(2008) Axel Don et al.   SOIL BIOLOGY & BIOCHEMISTRY

Factors influencing variability of proteolytic genes and activities in arable soils

(2008) M. Mrkonjic Fuka et al.   SOIL BIOLOGY & BIOCHEMISTRY

Effect of carbon sources and shock loading on the removal of chlorophenols in sequential anaerobic–aerobic reactors

(2007) Partha Sarathi Majumder et al.   BIORESOURCE TECHNOLOGY