Review
Cell Biology
Xi-min Hu, Zhi-xin Li, Rui-han Lin, Jia-qi Shan, Qing-wei Yu, Rui-xuan Wang, Lv-shuang Liao, Wei-tao Yan, Zhen Wang, Lei Shang, Yanxia Huang, Qi Zhang, Kun Xiong
Summary: Researchers have made new progress in exploring the field of regulated cell death, but they are faced with the complexity of mechanisms and difficulties in distinguishing different types of death. This article provides a systematic guideline and a comprehensive evaluation of detection methods to help researchers make reliable selections, while also highlighting some new regulated cell death processes and detection techniques.
FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY
(2021)
Article
Geography, Physical
Wolfgang Schwanghart, Christian Molkenthin, Dirk Scherler
Summary: PPS is a new numeric class in TopoToolbox that supports exploratory analysis, statistical modeling, simulation, and visualization of point processes along river networks. Through three case studies, it is demonstrated how processes and factors controlling the spatial density of geomorphic phenomena along river networks can be inferred.
EARTH SURFACE PROCESSES AND LANDFORMS
(2021)
Article
Optics
Fuping Wu, Yi Luo, Zhiwei Cui
Summary: Structured light beams have unique properties and potential applications. This paper provides a systematic summary and comparison of scalar diffraction theories for structured light beams, deriving analytical propagation expressions and simulating the propagation process. The study of structured light beam propagation is of great significance.
Article
Psychology, Multidisciplinary
Meysam Asgari, Liu Chen, Eric Fombonne
Summary: The study proposed an automatic approach to quantify prosodic abnormalities in individuals with autism, leading to successful differentiation from typically developing individuals using machine learning models. The models outperformed a chance model on an empirical evaluation with significant implications for treatment research and early detection of autism.
FRONTIERS IN PSYCHOLOGY
(2021)
Article
Chemistry, Analytical
Stefano Pini, Guido Borghi, Roberto Vezzani, Davide Maltoni, Rita Cucchiara
Summary: This paper analyzes deep face recognition methods based on depth data, finding configurations that maximize recognition accuracy and generalization capabilities. Experimental results suggest that methods based on normal images and point clouds perform better, showing superior generalization compared to other 2D and 3D alternatives.
Article
Green & Sustainable Science & Technology
Anne-Marie Boulay, Pascal Lesage, Ben Amor, Stephan Pfister
Summary: This study recommends accompanying impact assessment methods with their uncertainty data to guide decision makers, using the AWARE model to assess uncertainty for water scarcity. It shows that uncertainty varies significantly globally, with lognormal distribution being the best fit for most regions. The study emphasizes the importance of improving resolution in water scarcity assessments and provides necessary data for software integration of AWARE uncertainty.
JOURNAL OF INDUSTRIAL ECOLOGY
(2021)
Article
Ecology
Emily B. Graham, Joseph E. Knelman
Summary: Understanding the processes of microbial community assembly is crucial for comprehending the role of microorganisms in ecosystem restoration and for optimizing management strategies. Important factors to consider when evaluating microbial community structure in the context of ecosystem recovery include: variations in community assembly processes, linkages to ecosystem function, and measurable microbial community attributes.
Article
Green & Sustainable Science & Technology
Tianqi Shi, Zeyu Han, Wei Gong, Xin Ma, Ge Han
Summary: A novel method based on the IPPF was proposed in this study to accurately and efficiently obtain point source emissions, which showed promising performance in Prairie grass emission experiment. This model is expected to play a crucial role in the development of environmental policies.
JOURNAL OF CLEANER PRODUCTION
(2021)
Article
Environmental Sciences
Betty Ehnvall, Anneli M. agren, Mats B. Nilsson, Joshua L. Ratcliffe, Kof fi Dodji Noumonvi, Matthias Peichl, William Lidberg, Reiner Giesler, Carl-Magnus Moerth, Mats G. Oquist
Summary: Vegetation plays a crucial role in the unique properties of natural mires, such as surface microtopography, high biodiversity, carbon sequestration, and water and nutrient regulation. However, the landscape controls behind mire vegetation patterns have previously been poorly described, limiting our understanding of the fundamental drivers of mire ecosystem services.
SCIENCE OF THE TOTAL ENVIRONMENT
(2023)
Article
Computer Science, Interdisciplinary Applications
Pedram Bazrafshan, Thinh On, Sina Basereh, Pinar Okumus, Arvin Ebrahimkhanlou
Summary: This paper introduces an innovative method to quantify damage based on surface cracks of reinforced concrete shear walls using artificial intelligence and graph theory. The proposed graph-based features are used for crack quantification and prediction of mechanical features. The approach focuses on quantifying the second stage of damage and achieves good regression results, demonstrating the effectiveness of the method in quantifying damage based on surface crack patterns.
COMPUTER-AIDED CIVIL AND INFRASTRUCTURE ENGINEERING
(2023)
Review
Endocrinology & Metabolism
Juliana Prudencio Jacques, Luciana Pinto Valadares, Adriana Castelo Moura, Maria Regina Fernandes Oliveira, Luciana Ansaneli Naves
Summary: This study aimed to describe the frequency of hypophysitis and hypopituitarism in cancer patients undergoing immunotherapy, as well as the clinical and demographic characteristics of these patients. The results showed that the incidence of hypophysitis was 3.20% and hypopituitarism was 0.42% in the evaluated population of 30,014 individuals. The main symptoms presented by patients with hypophysitis were fatigue and headache.
FRONTIERS IN ENDOCRINOLOGY
(2023)
Article
Environmental Sciences
P. Llagostera, C. Comas, N. Lopez
Summary: Wildlife-vehicle collisions are a coexistence issue between humans and the environment, affecting road safety, wildlife management, and road infrastructures. A new approach using algorithms and road variables has been proposed to determine the safest route, based on wildlife-vehicle collision patterns.
SCIENCE OF THE TOTAL ENVIRONMENT
(2022)
Article
Green & Sustainable Science & Technology
Trine Henriksen, Thomas F. Astrup, Anders Damgaard
Summary: A novel framework is proposed for the evaluation of representativeness of LCI data, including an analysis of data importance and modification of quality criteria based on unit process characteristics. The framework involves analyzing temporal, geographical, and technological characteristics to ensure data relevance, as demonstrated in a case study on household waste incineration in Denmark. Although time demanding, the method provides unique data quality criteria for waste incineration unit processes.
JOURNAL OF INDUSTRIAL ECOLOGY
(2021)
Article
Ecology
Thomas Luypaert, Anderson S. Bueno, Gabriel S. Masseli, Igor L. Kaefer, Marconi Campos-Cerqueira, Carlos A. Peres, Torbjorn Haugaasen
Summary: This study presents a workflow to quantify soundscape diversity through the lens of trait-based ecology. Using Operational Sound Units (OSUs) and the framework of Hill numbers, three metrics are proposed to capture different aspects of acoustic trait space usage. The study demonstrates that soundscape richness and evenness are positively correlated with the richness of sound-producing species.
METHODS IN ECOLOGY AND EVOLUTION
(2022)
Article
Multidisciplinary Sciences
Joao A. A. Ascensao, Kelly M. M. Wetmore, Benjamin H. H. Good, Adam P. P. Arkin, Oskar Hallatschek
Summary: Ascensao et al. engineered knockout libraries of a nascent bacterial community and found that ecological and epistatic patterns combine to shape adaptive landscapes, despite idiosyncratic behavior of individual knockouts. The study also revealed that fitness effects are correlated with evolutionary outcomes for certain conditions, indicating shifting patterns of adaptation.
NATURE COMMUNICATIONS
(2023)
Article
Ecology
Felix May, Thorsten Wiegand, Andreas Huth, Jonathan M. Chase
Article
Biodiversity Conservation
J. M. Fedriani, D. Ayllon, T. Wiegand, V Grimm
Article
Ecology
Kelly F. O. Ribeiro, Valeria F. Martins, Thorsten Wiegand, Flavio A. M. Santos
Summary: Investigations on the ecological processes in white-sand flooded forests have shown that habitat filtering is the most important factor influencing the distribution of congeneric species, while interspecific competition and dispersal limitation have less impact. Maintaining the different habitats in these threatened environments is crucial for preserving high species richness.
ECOLOGY AND EVOLUTION
(2021)
Review
Ecology
Petr Keil, Thorsten Wiegand, Aniko B. Toth, Daniel J. Mcglinn, Jonathan M. Chase
Summary: Interspecific spatial associations (ISA) provide insights into community structuring, but have been primarily examined in the context of interspecific interactions. Neglect of other aspects of ISA, confusion regarding measurement approaches, and uncertain theoretical connections to biodiversity facets, highlight the need for a specific focus on ISA in biodiversity assessments. ISA measurements are more informative when spatially explicit, and links to classical biodiversity aspects such as alpha, beta, and gamma diversity mostly fail to reflect ISA changes, except for average pairwise beta diversity. Study of ISA can provide tests for biodiversity theories and explore potentially predictive macroecological patterns beyond biotic interactions.
ECOLOGICAL MONOGRAPHS
(2021)
Article
Ecology
Adam Thomas Clark, Jean-Francois Arnoldi, Yuval R. Zelnik, Gyorgy Barabas, Dorothee Hodapp, Canan Karakoc, Sara Koenig, Viktoriia Radchuk, Ian Donohue, Andreas Huth, Claire Jacquet, Claire de Mazancourt, Andrea Mentges, Dorian Nothaass, Lauren G. Shoemaker, Franziska Taubert, Thorsten Wiegand, Shaopeng Wang, Jonathan M. Chase, Michel Loreau, Stanley Harpole
Summary: Ecological stability refers to how interacting species in a system change over time and respond to disturbances. It is challenging to compare stability measurements across different sites and systems due to sampling scales and environmental context. Stochastic dynamical systems theory can be used to derive statistical scaling relationships for resilience, resistance, and invariance, aiding in predicting average stability across various scales and revealing unknown heterogeneity information.
Article
Ecology
Thorsten Wiegand, Xugao Wang, Kristina J. Anderson-Teixeira, Norman A. Bourg, Min Cao, Xiuqin Ci, Stuart J. Davies, Zhanqing Hao, Robert W. Howe, W. John Kress, Juyu Lian, Jie Li, Luxiang Lin, Yiching Lin, Keping Ma, William McShea, Xiangcheng Mi, Sheng-Hsin Su, I-Fang Sun, Amy Wolf, Wanhui Ye, Andreas Huth
Summary: Ecology still cannot fully explain why so many tree species coexist in natural communities, with a major difficulty being linking individual-level processes to community dynamics. By using tree spatial data, spatial statistics, and dynamical theory, the relationship between spatial patterns and population-level interaction coefficients can be revealed, impacting multispecies dynamics and coexistence.Mechanisms such as animal seed dispersal lead to a rare-species advantage and coexistence of otherwise neutral competitors.
NATURE ECOLOGY & EVOLUTION
(2021)
Article
Biodiversity Conservation
Antonio Archidona-Yuste, Thorsten Wiegand, Nico Eisenhauer, Carolina Cantalapiedra-Navarrete, Juan E. Palomares-Rius, Pablo Castillo
Summary: The study focuses on how environmental changes drive the homogenization of ecological communities, specifically looking at the diversity of soil nematodes. Results show that transitioning from natural to agricultural systems and increasing land-use intensity can significantly enhance the functional similarities of plant-feeding nematode communities.
JOURNAL OF APPLIED ECOLOGY
(2021)
Article
Plant Sciences
Antonio J. Perea, Thorsten Wiegand, Jose L. Garrido, Pedro J. Rey, Julio M. Alcantara
Summary: This study highlights the importance of seed dispersal by frugivores in shaping plant communities in Mediterranean forests. Spatial patterns across different life stages are driven by seed dispersal mechanisms and spatial self-thinning, with little evidence of negative interactions. This research suggests that combining spatial point pattern analysis with network analysis and species traits is a promising approach to understanding the processes underlying local diversity patterns.
JOURNAL OF ECOLOGY
(2021)
Article
Multidisciplinary Sciences
Rico Fischer, Franziska Taubert, Michael S. Mueller, Juergen Groeneveld, Sebastian Lehmann, Thorsten Wiegand, Andreas Huth
Summary: The study shows that approximately 31% of the total tropical forest area is now located at the forest edge, with about 20 million additional forest fragments, significantly impacting connectivity within tropical landscapes. By 2100, it is projected that 50% of tropical forest area will be at the forest edge, leading to up to 500 million metric tons of additional carbon emissions per year.
Article
Ecology
Maria V. Jimenez-Franco, Eva Gracia, Roberto C. Rodriguez-Caro, Jose D. Anadon, Thorsten Wiegand, Francisco Botella, Andres Gimenez
Summary: Land-use change is a major threat to global biodiversity. This study presents an interdisciplinary modelling approach to assess the population dynamics of long-lived species in response to agricultural abandonment and anthropisation. The results show that changes in movement patterns caused by land-use change can have lagged impacts on population density, reproductive rate, and extinction probability.
Article
Ecology
Antonio J. Perea, Thorsten Wiegand, Jose L. Garrido, Pedro J. Rey, Julio M. Alcantara
Summary: This study used point pattern analysis to examine the spatial phylogenetic and phenotypic structures of plant communities at different stages. The results showed that there were different patterns between saplings and adult plants, with adult plants exhibiting phylogenetic clustering. There were also differences in neighbor composition between species at different stages. The findings highlight the importance of ontogenetic shifts in plant community assembly processes.
Article
Ecology
Mike H. Salazar H. Villegas, Thorsten Wiegand, Roy Gonzalez-M, Susana Rodriguez-Buritica, Mohammed Qasim, Elmar Csaplovics
Summary: Analyzing the spatial association pattern among species can provide insights into forest dynamics and assembly mechanisms. This study used spatial point pattern analysis techniques to assess the spatial association network among eight species in a tropical dry forest in Colombia. Results showed that positive association patterns dominated at smaller spatial scales, while negative interactions prevailed at intermediate scales. The examined association patterns were found to be related to species traits and could provide valuable information for both community assembly understanding and restoration directions.
FRONTIERS IN FORESTS AND GLOBAL CHANGE
(2023)
Article
Ecology
Raquel Munoz-Gallego, Thorsten Wiegand, Anna Traveset, Jose M. Fedriani
Summary: This study investigates the interaction between Mediterranean palm and feral goat, and finds that the intensity of goat activity affects palm distribution, seed rain, and seed predation. In areas with low goat activity, seeds are spatially aggregated around adult palms but experience higher insect-seed predation and lower seed germination success. In areas with high goat activity, palm seed dispersal and recruitment are almost non-existent due to heavy consumption by goats. The study shows how the outcome of plant-animal interactions can vary from mutualism to antagonism and even reproductive collapse depending on species abundance and activity.
Article
Ecology
Pablo A. Cipriotti, Sandro Puetz, Jose M. Paruelo, Norberto J. Bartoloni, Thorsten Wiegand
Summary: One of the central problems in ecology is how to scale from small-scale observations and experiments to large-scale patterns and processes. This study proposes a systematic strategy to approximate the dynamics of detailed simulation models using Markov chain and network analysis. The study finds that stocking rate and grazing season have nonlinear effects on steppe dynamics, with seasonal grazing at intermediate stocking rates yielding the best results. Specific vegetation states are identified as early warning signals for irreversible vegetation changes.
Review
Biodiversity Conservation
Maaike Y. Bader, Luis D. Llambi, Bradley S. Case, Hannah L. Buckley, Johanna M. Toivonen, J. Julio Camarero, David M. Cairns, Carissa D. Brown, Thorsten Wiegand, Lynn M. Resler
Summary: Globally, treeline ecotones exhibit diverse spatial patterns, providing valuable information about the processes influencing treeline dynamics. A new framework focuses on hillside-scale patterns and dimensional changes in tree cover, clustering, height, and shape, to better understand demographic processes and growth patterns affecting treelines. Improved recognition of treeline patterns and collaborative research efforts are necessary to advance our understanding of treeline-forming processes and vegetation dynamics in response to climate warming.