Extensive tissue-specific transcriptomic plasticity in maize primary roots upon water deficit

Interplay between reactive oxygen species and hormones in the control of plant development and stress tolerance

(2015) Xiao-Jian Xia et al.   JOURNAL OF EXPERIMENTAL BOTANY

Adaptive evolution and divergent expression of heat stress transcription factors in grasses

(2014) Zefeng Yang et al.   BMC EVOLUTIONARY BIOLOGY

Transcriptomic complexity in young maize primary roots in response to low water potentials

(2014) Nina Opitz et al.   BMC GENOMICS

Stress-induced electrolyte leakage: the role of K+-permeable channels and involvement in programmed cell death and metabolic adjustment

(2014) Vadim Demidchik et al.   JOURNAL OF EXPERIMENTAL BOTANY

Regulation of potassium transport in plants under hostile conditions: implications for abiotic and biotic stress tolerance

(2014) Sergey Shabala et al.   PHYSIOLOGIA PLANTARUM

Nonsyntenic Genes Drive Highly Dynamic Complementation of Gene Expression in Maize Hybrids

(2014) A. Paschold et al.   PLANT CELL

Roles of lipids as signaling molecules and mitigators during stress response in plants

(2014) Yozo Okazaki et al.   PLANT JOURNAL

Aquaporins: Highly Regulated Channels Controlling Plant Water Relations

(2014) F. Chaumont et al.   PLANT PHYSIOLOGY

Possible roles of basic helix-loop-helix transcription factors in adaptation to drought

(2014) Graciela Castilhos et al.   PLANT SCIENCE

Greater Sensitivity to Drought Accompanies Maize Yield Increase in the U.S. Midwest

(2014) D. B. Lobell et al.   SCIENCE

voom: precision weights unlock linear model analysis tools for RNA-seq read counts

(2014) Charity W Law et al.   GENOME BIOLOGY

Plant aquaporins: Roles in plant physiology

(2013) Guowei Li et al.   BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS

Genome-wide expression profiling of maize in response to individual and combined water and nitrogen stresses

(2013) Sabrina Humbert et al.   BMC GENOMICS

The bHLH transcription factor SPATULA regulates root growth by controlling the size of the root meristem

(2013) Srilakshmi Makkena et al.   BMC PLANT BIOLOGY

The role of gibberellin signalling in plant responses to abiotic stress

(2013) E. H. Colebrook et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

PlantTFDB 3.0: a portal for the functional and evolutionary study of plant transcription factors

(2013) Jinpu Jin et al.   NUCLEIC ACIDS RESEARCH

A Developmental Transcriptional Network for Maize Defines Coexpression Modules

(2013) G. S. Downs et al.   PLANT PHYSIOLOGY

RNA-Seq Transcriptome Profiling of Upland Cotton (Gossypium hirsutum L.) Root Tissue under Water-Deficit Stress

(2013) Megan J. Bowman et al.   PLoS One

The Maize (Zea mays L.) AUXIN/INDOLE-3-ACETIC ACID Gene Family: Phylogeny, Synteny, and Unique Root-Type and Tissue-Specific Expression Patterns during Development

(2013) Yvonne Ludwig et al.   PLoS One

Bayesian analysis of RNA sequencing data by estimating multiple shrinkage priors

(2012) M. A. Van De Wiel et al.   BIOSTATISTICS

Contrapuntal role of ABA: Does it mediate stress tolerance or plant growth retardation under long-term drought stress?

(2012) Nese Sreenivasulu et al.   GENE

Gene expression profiling of soybean leaves and roots under salt, saline–alkali and drought stress by high-throughput Illumina sequencing

(2012) Xiu-Duo Fan et al.   GENE

Apoplastic hydrogen peroxide in the growth zone of the maize primary root under water stress. I. Increased levels are specific to the apical region of growth maintenance

(2012) Priyamvada Voothuluru et al.   JOURNAL OF EXPERIMENTAL BOTANY

Drought, salt, and temperature stress-induced metabolic rearrangements and regulatory networks

(2012) J. Krasensky et al.   JOURNAL OF EXPERIMENTAL BOTANY

Genome-wide Transcription Factor Gene Prediction and their Expressional Tissue-Specificities in MaizeF

(2012) Yi Jiang et al.   Journal of Integrative Plant Biology

Molecular and Physiological Analysis of Growth-Limiting Drought Stress in Brachypodium distachyon Leaves

(2012) Wim Verelst et al.   Molecular Plant

Constitutive Activation of Transcription Factor OsbZIP46 Improves Drought Tolerance in Rice

(2012) N. Tang et al.   PLANT PHYSIOLOGY

Effects of Drought on Gene Expression in Maize Reproductive and Leaf Meristem Tissue Revealed by RNA-Seq

(2012) A. Kakumanu et al.   PLANT PHYSIOLOGY

Isolation and Characterization of Maize PMP3 Genes Involved in Salt Stress Tolerance

(2012) Jing Fu et al.   PLoS One

AP2/ERF family transcription factors in plant abiotic stress responses

(2011) Junya Mizoi et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

Functional annotation of the transcriptome of Sorghum bicolor in response to osmotic stress and abscisic acid

(2011) Diana V Dugas et al.   BMC GENOMICS

Genome-wide identification, classification and analysis of heat shock transcription factor family in maize

(2011) Yong-Xiang Lin et al.   BMC GENOMICS

Functions and Application of the AP2/ERF Transcription Factor Family in Crop ImprovementF

(2011) Zhao-Shi Xu et al.   Journal of Integrative Plant Biology

Survival and growth of Arabidopsis plants given limited water are not equal

(2011) Aleksandra Skirycz et al.   NATURE BIOTECHNOLOGY

Short-term control of maize cell and root water permeability through plasma membrane aquaporin isoforms

(2011) CHARLES HACHEZ et al.   PLANT CELL AND ENVIRONMENT

Genes Identified by Visible Mutant Phenotypes Show Increased Bias toward One of Two Subgenomes of Maize

(2011) James C. Schnable et al.   PLoS One

Challenges in breeding for yield increase for drought

(2011) Thomas R. Sinclair   TRENDS IN PLANT SCIENCE

ROS signaling: the new wave?

(2011) Ron Mittler et al.   TRENDS IN PLANT SCIENCE

Monitoring the Expression of Maize Genes in Developing Kernels under Drought Stress using Oligo-microarray

(2010) Meng Luo et al.   Journal of Integrative Plant Biology

The developmental dynamics of the maize leaf transcriptome

(2010) Pinghua Li et al.   NATURE GENETICS

agriGO: a GO analysis toolkit for the agricultural community

(2010) Zhou Du et al.   NUCLEIC ACIDS RESEARCH

Breeding Technologies to Increase Crop Production in a Changing World

(2010) M. Tester et al.   SCIENCE

A scaling normalization method for differential expression analysis of RNA-seq data

(2010) Mark D Robinson et al.   GENOME BIOLOGY

Approximate Bayesian inference for latent Gaussian models by using integrated nested Laplace approximations

(2009) Håvard Rue et al.   JOURNAL OF THE ROYAL STATISTICAL SOCIETY SERIES B-STATISTICAL METHODOLOGY

Antagonistic HLH/bHLH Transcription Factors Mediate Brassinosteroid Regulation of Cell Elongation and Plant Development in Rice and Arabidopsis

(2009) L.-Y. Zhang et al.   PLANT CELL

Complexity and coordination of root growth at low water potentials: recent advances from transcriptomic and proteomic analyses

(2009) MINEO YAMAGUCHI et al.   PLANT CELL AND ENVIRONMENT

Specification of Cortical Parenchyma and Stele of Maize Primary Roots by Asymmetric Levels of Auxin, Cytokinin, and Cytokinin-Regulated Proteins

(2009) M. Saleem et al.   PLANT PHYSIOLOGY

Developmental Stage Specificity and the Role of Mitochondrial Metabolism in the Response of Arabidopsis Leaves to Prolonged Mild Osmotic Stress

(2009) A. Skirycz et al.   PLANT PHYSIOLOGY

Analysis of Gene Expression and Physiological Responses in Three Mexican Maize Landraces under Drought Stress and Recovery Irrigation

(2009) Corina Hayano-Kanashiro et al.   PLoS One

The B73 Maize Genome: Complexity, Diversity, and Dynamics

(2009) P. S. Schnable et al.   SCIENCE

Proline: a multifunctional amino acid

(2009) László Szabados et al.   TRENDS IN PLANT SCIENCE

Differential gene expression analysis of maize leaf at heading stage in response to water-deficit stress

(2008) Guidong Yue et al.   BIOSCIENCE REPORTS

Spatial distribution of transcript changes in the maize primary root elongation zone at low water potential

(2008) William G Spollen et al.   BMC PLANT BIOLOGY

Addressing drought tolerance in maize by transcriptional profiling and mapping

(2008) Rosanna Marino et al.   MOLECULAR GENETICS AND GENOMICS