标题
Review of processing and analysis methods for DNA methylation array data
作者
关键词
-
出版物
BRITISH JOURNAL OF CANCER
Volume 109, Issue 6, Pages 1394-1402
出版商
Springer Nature
发表日期
2013-08-28
DOI
10.1038/bjc.2013.496
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- A data-driven approach to preprocessing Illumina 450K methylation array data
- (2013) Ruth Pidsley et al. BMC GENOMICS
- A genome-wide methylation study on obesity
- (2013) Xiaojing Xu et al. Epigenetics
- Blood-based profiles of DNA methylation predict the underlying distribution of cell types
- (2013) Devin C Koestler et al. Epigenetics
- Discovery of cross-reactive probes and polymorphic CpGs in the Illumina Infinium HumanMethylation450 microarray
- (2013) Yi-an Chen et al. Epigenetics
- An evaluation of analysis pipelines for DNA methylation profiling using the Illumina HumanMethylation450 BeadChip platform
- (2013) Francesco Marabita et al. Epigenetics
- Epigenome-wide association data implicate DNA methylation as an intermediary of genetic risk in rheumatoid arthritis
- (2013) Yun Liu et al. NATURE BIOTECHNOLOGY
- An integrative network algorithm identifies age-associated differential methylation interactome hotspots targeting stem-cell differentiation pathways
- (2013) James West et al. Scientific Reports
- Differential variability improves the identification of cancer risk markers in DNA methylation studies profiling precursor cancer lesions
- (2012) A. E. Teschendorff et al. BIOINFORMATICS
- IMA: an R package for high-throughput analysis of Illumina's 450K Infinium methylation data
- (2012) D. Wang et al. BIOINFORMATICS
- CpGassoc: an R function for analysis of DNA methylation microarray data
- (2012) Richard T. Barfield et al. BIOINFORMATICS
- A beta-mixture quantile normalization method for correcting probe design bias in Illumina Infinium 450 k DNA methylation data
- (2012) Andrew E. Teschendorff et al. BIOINFORMATICS
- A comparison of feature selection and classification methods in DNA methylation studies using the Illumina Infinium platform
- (2012) Joanna J Zhuang et al. BMC BIOINFORMATICS
- DNA methylation arrays as surrogate measures of cell mixture distribution
- (2012) Eugene Houseman et al. BMC BIOINFORMATICS
- Genetic analysis of DNA methylation and gene expression levels in whole blood of healthy human subjects
- (2012) Kristel R van Eijk et al. BMC GENOMICS
- Measuring the methylome in clinical samples: Improved processing of the Infinium Human Methylation450 BeadChip Array
- (2012) Hong Pan et al. Epigenetics
- MethLAB: A graphical user interface package for the analysis of array-based DNA methylation data
- (2012) Varun Kilaru et al. Epigenetics
- Genome-wide Methylation Profiles Reveal Quantitative Views of Human Aging Rates
- (2012) Gregory Hannum et al. MOLECULAR CELL
- The Cancer Cell Line Encyclopedia enables predictive modelling of anticancer drug sensitivity
- (2012) Jordi Barretina et al. NATURE
- Analysing and interpreting DNA methylation data
- (2012) Christoph Bock NATURE REVIEWS GENETICS
- Factors underlying variable DNA methylation in a human community cohort
- (2012) L. L. Lam et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Complete pipeline for Infinium® Human Methylation 450K BeadChip data processing using subset quantile normalization for accurate DNA methylation estimation
- (2012) Nizar Touleimat et al. Epigenomics
- Population-specificity of human DNA methylation
- (2012) Hunter B Fraser et al. GENOME BIOLOGY
- SWAN: Subset-quantile Within Array Normalization for Illumina Infinium HumanMethylation450 BeadChips
- (2012) Jovana Maksimovic et al. GENOME BIOLOGY
- methylKit: a comprehensive R package for the analysis of genome-wide DNA methylation profiles
- (2012) Altuna Akalin et al. GENOME BIOLOGY
- Independent surrogate variable analysis to deconvolve confounding factors in large-scale microarray profiling studies
- (2011) Andrew E. Teschendorff et al. BIOINFORMATICS
- Batch effect correction for genome-wide methylation data with Illumina Infinium platform
- (2011) Zhifu Sun et al. BMC Medical Genomics
- DNA methylation profiling reveals a predominant immune component in breast cancers
- (2011) Sarah Dedeurwaerder et al. EMBO Molecular Medicine
- High density DNA methylation array with single CpG site resolution
- (2011) Marina Bibikova et al. GENOMICS
- Statistical approaches for the analysis of DNA methylation microarray data
- (2011) Kimberly D. Siegmund HUMAN GENETICS
- Epigenome-wide association studies for common human diseases
- (2011) Vardhman K. Rakyan et al. NATURE REVIEWS GENETICS
- Evaluation of the Infinium Methylation 450K technology
- (2011) Sarah Dedeurwaerder et al. Epigenomics
- Preprocessing differential methylation hybridization microarray data
- (2011) Shuying Sun et al. BioData Mining
- Semi-supervised recursively partitioned mixture models for identifying cancer subtypes
- (2010) Devin C. Koestler et al. BIOINFORMATICS
- A statistical framework for Illumina DNA methylation arrays
- (2010) Pei Fen Kuan et al. BIOINFORMATICS
- Comparison of Beta-value and M-value methods for quantifying methylation levels by microarray analysis
- (2010) Pan Du et al. BMC BIOINFORMATICS
- Subset Quantile Normalization Using Negative Control Features
- (2010) Zhijin Wu et al. JOURNAL OF COMPUTATIONAL BIOLOGY
- Epigenetics as a unifying principle in the aetiology of complex traits and diseases
- (2010) Arturas Petronis NATURE
- Tackling the widespread and critical impact of batch effects in high-throughput data
- (2010) Jeffrey T. Leek et al. NATURE REVIEWS GENETICS
- Principles and challenges of genome-wide DNA methylation analysis
- (2010) Peter W. Laird NATURE REVIEWS GENETICS
- Hunting for the 5th base: Techniques for analyzing DNA methylation
- (2009) Ole Ammerpohl et al. BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS
- An Epigenetic Signature in Peripheral Blood Predicts Active Ovarian Cancer
- (2009) Andrew E. Teschendorff et al. PLoS One
- lumi: a pipeline for processing Illumina microarray
- (2008) P. Du et al. BIOINFORMATICS
- Model-based clustering of DNA methylation array data: a recursive-partitioning algorithm for high-dimensional data arising as a mixture of beta distributions
- (2008) E Andres Houseman et al. BMC BIOINFORMATICS
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