Transcriptomic analysis of crustacean neuropeptide signaling during the moult cycle in the green shore crab, Carcinus maenas

Functional Characterization and Signaling Systems of Corazonin and Red Pigment Concentrating Hormone in the Green Shore Crab, Carcinus maenas

(2018) Jodi L. Alexander et al.   Frontiers in Neuroscience

Understanding Insulin Endocrinology in Decapod Crustacea: Molecular Modelling Characterization of an Insulin-Binding Protein and Insulin-Like Peptides in the Eastern Spiny Lobster, Sagmariasus verreauxi

(2017) Jennifer Chandler et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Characterisation and pharmacological analysis of a crustacean G protein-coupled receptor: the red pigment-concentrating hormone receptor of Daphnia pulex

(2017) Heather G. Marco et al.   Scientific Reports

Identification and Characterization of an Insulin-Like Receptor Involved in Crustacean Reproduction

(2016) O. Sharabi et al.   ENDOCRINOLOGY

In silico prediction of the G-protein coupled receptors expressed during the metamorphic molt of Sagmariasus verreauxi (Crustacea: Decapoda) by mining transcriptomic data: RNA-seq to repertoire

(2016) Sean J. Buckley et al.   GENERAL AND COMPARATIVE ENDOCRINOLOGY

Neuropeptide evolution: Chelicerate neurohormone and neuropeptide genes may reflect one or more whole genome duplications

(2016) Jan A. Veenstra   GENERAL AND COMPARATIVE ENDOCRINOLOGY

Expansion of the neuropeptidome of the globally invasive marine crab Carcinus maenas

(2016) Andrew E. Christie   GENERAL AND COMPARATIVE ENDOCRINOLOGY

Characterizing the physiological and behavioral roles of proctolin in Drosophila melanogaster

(2016) Kiel G. Ormerod et al.   JOURNAL OF NEUROPHYSIOLOGY

Similarities between decapod and insect neuropeptidomes

(2016) Jan A. Veenstra   PeerJ

Identification and expression profiles of neuropeptides and their G protein-coupled receptors in the rice stem borer Chilo suppressalis

(2016) Gang Xu et al.   Scientific Reports

Genetic analysis of Eclosion hormone action during Drosophila larval ecdysis

(2015) E. Kru ger et al.   DEVELOPMENT

The power of next-generation sequencing as illustrated by the neuropeptidome of the crayfish Procambarus clarkii

(2015) Jan A. Veenstra   GENERAL AND COMPARATIVE ENDOCRINOLOGY

The Splice Isoforms of the Drosophila Ecdysis Triggering Hormone Receptor Have Developmentally Distinct Roles

(2015) F. Diao et al.   GENETICS

Ovary ecdysteroidogenic hormone requires a receptor tyrosine kinase to activate egg formation in the mosquitoAedes aegypti

(2015) Kevin J. Vogel et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Neuropeptidergic Signaling in the American Lobster Homarus americanus: New Insights from High-Throughput Nucleotide Sequencing

(2015) Andrew E. Christie et al.   PLoS One

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Expansion of the Litopenaeus vannamei and Penaeus monodon peptidomes using transcriptome shotgun assembly sequence data

(2014) Andrew E. Christie   GENERAL AND COMPARATIVE ENDOCRINOLOGY

Prediction of the peptidomes of Tigriopus californicus and Lepeophtheirus salmonis (Copepoda, Crustacea)

(2014) Andrew E. Christie   GENERAL AND COMPARATIVE ENDOCRINOLOGY

Identification and Characterization of Receptors for Ion Transport Peptide (ITP) and ITP-like (ITPL) in the SilkwormBombyx mori

(2014) Chiaki Nagai et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Characterization of the shrimp neuroparsin (MeNPLP): RNAi silencing resulted in inhibition of vitellogenesis

(2014) Shi Ping Yang et al.   FEBS Open Bio

On the optimal trimming of high-throughput mRNA sequence data

(2014) Matthew D. MacManes   Frontiers in Genetics

Neural and Hormonal Control of Postecdysial Behaviors in Insects

(2013) Benjamin H. White et al.   Annual Review of Entomology

IDBA-tran: a more robust de novo de Bruijn graph assembler for transcriptomes with uneven expression levels

(2013) Yu Peng et al.   BIOINFORMATICS

Optimizing de novo assembly of short-read RNA-seq data for phylogenomics

(2013) Ya Yang et al.   BMC GENOMICS

A Novel Hormone Is Required for the Development of Reproductive Phenotypes in Adult Female Crabs

(2013) Nilli Zmora et al.   ENDOCRINOLOGY

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Transcriptome analysis of neuropeptides and G-protein coupled receptors (GPCRs) for neuropeptides in the brown planthopper Nilaparvata lugens

(2013) Yoshiaki Tanaka et al.   PEPTIDES

Oases: robust de novo RNA-seq assembly across the dynamic range of expression levels

(2012) Marcel H. Schulz et al.   BIOINFORMATICS

Bursicon and neuropeptide cascades during the ecdysis program of the shore crab, Carcinus maenas

(2012) Simon George Webster et al.   GENERAL AND COMPARATIVE ENDOCRINOLOGY

ExPASy: SIB bioinformatics resource portal

(2012) P. Artimo et al.   NUCLEIC ACIDS RESEARCH

More than two decades of research on insect neuropeptide GPCRs: an overview

(2012) Jelle Caers et al.   Frontiers in Endocrinology

From the discovery of the crustacean androgenic gland to the insulin-like hormone in six decades

(2011) Tomer Ventura et al.   GENERAL AND COMPARATIVE ENDOCRINOLOGY

The CHH-superfamily of multifunctional peptide hormones controlling crustacean metabolism, osmoregulation, moulting, and reproduction

(2011) Simon George Webster et al.   GENERAL AND COMPARATIVE ENDOCRINOLOGY

Genomics, Transcriptomics, and Peptidomics ofDaphnia pulexNeuropeptides and Protein Hormones

(2011) Heinrich Dircksen et al.   JOURNAL OF PROTEOME RESEARCH

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

Crustacean neuropeptides

(2010) Andrew E. Christie et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

Identification and expression of mRNAs encoding bursicon in the plesiomorphic central nervous system of Homarus gammarus

(2010) Jasmine H. Sharp et al.   GENERAL AND COMPARATIVE ENDOCRINOLOGY

Arthropod relationships revealed by phylogenomic analysis of nuclear protein-coding sequences

(2010) Jerome C. Regier et al.   NATURE

Many sequence-specific chromatin modifying protein-binding motifs show strong positional preferences for potential regulatory regions in the Saccharomyces cerevisiae genome

(2010) Loren Hansen et al.   NUCLEIC ACIDS RESEARCH

RNA interference of insulin-related peptide and neuroparsins affects vitellogenesis in the desert locust Schistocerca gregaria

(2010) Liesbeth Badisco et al.   PEPTIDES

Drosophila neuropeptides in regulation of physiology and behavior

(2010) Dick R. Nässel et al.   PROGRESS IN NEUROBIOLOGY

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

The MIQE Guidelines: Minimum Information for Publication of Quantitative Real-Time PCR Experiments

(2009) S. A. Bustin et al.   CLINICAL CHEMISTRY

Characterization of the Carcinus maenas neuropeptidome by mass spectrometry and functional genomics

(2009) Mingming Ma et al.   GENERAL AND COMPARATIVE ENDOCRINOLOGY

Crustacean hyperglycemic hormone (CHH) neuropeptidesfamily: Functions, titer, and binding to target tissues

(2009) J. Sook Chung et al.   GENERAL AND COMPARATIVE ENDOCRINOLOGY

Ecdysis triggering hormone signaling in arthropods

(2009) Ladislav Roller et al.   PEPTIDES

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

(2008) D. R. Zerbino et al.   GENOME RESEARCH

Neuropeptide Receptor Transcriptome Reveals Unidentified Neuroendocrine Pathways

(2008) Naoki Yamanaka et al.   PLoS One

A genome-wide inventory of neurohormone GPCRs in the red flour beetle Tribolium castaneum

(2007) Frank Hauser et al.   FRONTIERS IN NEUROENDOCRINOLOGY

Identification and developmental expression of mRNAs encoding putative insect cuticle hardening hormone, bursicon in the green shore crab Carcinus maenas

(2007) David C. Wilcockson et al.   GENERAL AND COMPARATIVE ENDOCRINOLOGY