Transcriptional profiles of bovine in vivo pre-implantation development

Metabolic requirements for the maintenance of self-renewing stem cells

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Fine mapping of genome activation in bovine embryos by RNA sequencing

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RNA-seq analysis of single bovine blastocysts

(2013) James L Chitwood et al.   BMC GENOMICS

Genetic programs in human and mouse early embryos revealed by single-cell RNA sequencing

(2013) Zhigang Xue et al.   NATURE

RNA-Seq analysis uncovers transcriptomic variations between morphologically similar in vivo- and in vitro-derived bovine blastocysts

(2012) Ashley M Driver et al.   BMC GENOMICS

Genetic Deletion of RALA and RALB Small GTPases Reveals Redundant Functions in Development and Tumorigenesis

(2012) Pascal Peschard et al.   CURRENT BIOLOGY

Human pre-implantation embryo development

(2012) K. K. Niakan et al.   DEVELOPMENT

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

(2012) Cole Trapnell et al.   Nature Protocols

Effect of ovarian stimulation on oocyte gene expression in cattle

(2012) T. Chu et al.   THERIOGENOLOGY

Comparison of transcriptomic landscapes of bovine embryos using RNA-Seq

(2011) Wen Huang et al.   BMC GENOMICS

Influence of Factors during Superovulation on Embryo Production in Korean Holstein Cattle

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Is My Network Module Preserved and Reproducible?

(2011) Peter Langfelder et al.   PLoS Computational Biology

Maternal control of early mouse development

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Rewirable gene regulatory networks in the preimplantation embryonic development of three mammalian species

(2010) D. Xie et al.   GENOME RESEARCH

RNA sequencing: advances, challenges and opportunities

(2010) Fatih Ozsolak et al.   NATURE REVIEWS GENETICS

Differential expression analysis for sequence count data

(2010) Simon Anders et al.   GENOME BIOLOGY

Non-genetic heterogeneity of cells in development: more than just noise

(2009) S. Huang   DEVELOPMENT

Changes in gene expression profiles of bovine embryos produced in vitro, by natural ovulation, or hormonal superstimulation

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Understanding the Warburg Effect: The Metabolic Requirements of Cell Proliferation

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WGCNA: an R package for weighted correlation network analysis

(2008) Peter Langfelder et al.   BMC BIOINFORMATICS

RNA-Seq: a revolutionary tool for transcriptomics

(2008) Zhong Wang et al.   NATURE REVIEWS GENETICS

Genome-wide expression profiling reveals distinct clusters of transcriptional regulation during bovine preimplantation development in vivo

(2008) W. A. Kues et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Superovulation and embryo transfer in Holstein cattle using sexed sperm

(2008) H. Hayakawa et al.   THERIOGENOLOGY