Transcriptome analysis during berry development provides insights into co-regulated and altered gene expression between a seeded wine grape variety and its seedless somatic variant

Mapping in an apple (Malus x domestica) F1 segregating population based on physical clustering of differentially expressed genes

(2014) Philip J Jensen et al.   BMC GENOMICS

Genome-wide analysis and expression profile of the bZIP transcription factor gene family in grapevine (Vitis vinifera)

(2014) Jinyi Liu et al.   BMC GENOMICS

Vegetative and Sperm Cell-Specific Aquaporins of Arabidopsis Highlight the Vacuolar Equipment of Pollen and Contribute to Plant Reproduction

(2014) M. M. Wudick et al.   PLANT PHYSIOLOGY

De novo transcriptome characterization of Vitis vinifera cv. Corvina unveils varietal diversity

(2013) Luca Venturini et al.   BMC GENOMICS

New stable QTLs for berry weight do not colocalize with QTLs for seed traits in cultivated grapevine (Vitis vinifera L.)

(2013) Agnès Doligez et al.   BMC PLANT BIOLOGY

Genetic diversity and population structure assessed by SSR and SNP markers in a large germplasm collection of grape

(2013) Francesco Emanuelli et al.   BMC PLANT BIOLOGY

The metacaspase gene family of Vitis vinifera L.: Characterization and differential expression during ovule abortion in stenospermocarpic seedless grapes

(2013) Chaohong Zhang et al.   GENE

Validation Assay of p3_VvAGL11 Marker in a Wide Range of Genetic Background for Early Selection of Stenospermocarpy in Vitis vinifera L.

(2013) Carlo Bergamini et al.   MOLECULAR BIOTECHNOLOGY

Rice MtN3/Saliva/SWEET Family Genes and Their Homologs in Cellular Organisms

(2013) Meng Yuan et al.   Molecular Plant

ABI3 controls embryo degreening through Mendel's I locus

(2013) F. Delmas et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Transcriptome analysis at four developmental stages of grape berry (Vitis vinifera cv. Shiraz) provides insights into regulated and coordinated gene expression

(2012) Crystal Sweetman et al.   BMC GENOMICS

VvBOR1, the Grapevine Ortholog of AtBOR1, Encodes an Efflux Boron Transporter That is Differentially Expressed Throughout Reproductive Development of Vitis vinifera L.

(2012) R. Perez-Castro et al.   PLANT AND CELL PHYSIOLOGY

FIMBRIN1 Is Involved in Lily Pollen Tube Growth by Stabilizing the Actin Fringe

(2012) H. Su et al.   PLANT CELL

The Grapevine Expression Atlas Reveals a Deep Transcriptome Shift Driving the Entire Plant into a Maturation Program

(2012) M. Fasoli et al.   PLANT CELL

A Conifer ABI3-Interacting Protein Plays Important Roles during Key Transitions of the Plant Life Cycle

(2012) Y. Zeng et al.   PLANT PHYSIOLOGY

Transparent Testa16 Plays Multiple Roles in Plant Development and Is Involved in Lipid Synthesis and Embryo Development in Canola

(2012) W. Deng et al.   PLANT PHYSIOLOGY

Molecular, genetic and transcriptional evidence for a role of VvAGL11 in stenospermocarpic seedlessness in grapevine

(2011) Nilo Mejía et al.   BMC PLANT BIOLOGY

Analysis of Gene Expression Patterns during Seed Coat Development in Arabidopsis

(2011) Gillian Dean et al.   Molecular Plant

Glycerol-3-Phosphate Acyltransferase 6 (GPAT6) Is Important for Tapetum Development in Arabidopsis and Plays Multiple Roles in Plant Fertility

(2011) Xiao-Chuan Li et al.   Molecular Plant

Functional Analysis of All AGAMOUS Subfamily Members in Rice Reveals Their Roles in Reproductive Organ Identity Determination and Meristem Determinacy

(2011) Ludovico Dreni et al.   PLANT CELL

Cytokinin Regulates the Activity of Reproductive Meristems, Flower Organ Size, Ovule Formation, and Thus Seed Yield inArabidopsis thaliana

(2011) Isabel Bartrina et al.   PLANT CELL

The MADS box genes SEEDSTICK and ARABIDOPSIS Bsister play a maternal role in fertilization and seed development

(2011) Chiara Mizzotti et al.   PLANT JOURNAL

The function of the RNA-binding protein TEL1 in moss reveals ancient regulatory mechanisms of shoot development

(2011) Julien Vivancos et al.   PLANT MOLECULAR BIOLOGY

Male Sterile2 Encodes a Plastid-Localized Fatty Acyl Carrier Protein Reductase Required for Pollen Exine Development in Arabidopsis

(2011) W. Chen et al.   PLANT PHYSIOLOGY

The chloroplast ribosomal protein L21 gene is essential for plastid development and embryogenesis in Arabidopsis

(2011) Tuanzhang Yin et al.   PLANTA

Fast and accurate long-read alignment with Burrows–Wheeler transform

(2010) Heng Li et al.   BIOINFORMATICS

Arabidopsis FIMBRIN5, an Actin Bundling Factor, Is Required for Pollen Germination and Pollen Tube Growth

(2010) Y. Wu et al.   PLANT CELL

Characterization of Transcriptional Complexity during Berry Development in Vitis vinifera Using RNA-Seq

(2010) S. Zenoni et al.   PLANT PHYSIOLOGY

Global analysis of gene activity during Arabidopsis seed development and identification of seed-specific transcription factors

(2010) B. H. Le et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Differential expression analysis for sequence count data

(2010) Simon Anders et al.   GENOME BIOLOGY

The ubiquitin extension protein S27a is differentially expressed in developing flower organs of Thompson seedless versus Thompson seeded grape isogenic clones

(2009) Uri Hanania et al.   PLANT CELL REPORTS

The SPOROCYTELESS/NOZZLE Gene Is Involved in Controlling Stamen Identity in Arabidopsis

(2009) X. Liu et al.   PLANT PHYSIOLOGY

Berry and phenology-related traits in grapevine (Vitis vinifera L.): From Quantitative Trait Loci to underlying genes

(2008) Laura Costantini et al.   BMC PLANT BIOLOGY

Cellular Programming of Plant Gene Imprinting

(2008) Jin Hoe Huh et al.   CELL

The importance of being essential: EMBRYO-DEFECTIVE genes in Arabidopsis

(2008) Martine Devic   COMPTES RENDUS BIOLOGIES

Differential Expression of WOX Genes Mediates Apical-Basal Axis Formation in the Arabidopsis Embryo

(2008) Holger Breuninger et al.   DEVELOPMENTAL CELL

RNA-Seq: a revolutionary tool for transcriptomics

(2008) Zhong Wang et al.   NATURE REVIEWS GENETICS

A novel role for oleosins in freezing tolerance of oilseeds inArabidopsis thaliana

(2008) Takashi L. Shimada et al.   PLANT JOURNAL

Wall associated kinases from plants — an overview

(2008) Vydehi Kanneganti et al.   PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS