Transcriptome analyses of the human retina identify unprecedented transcript diversity and 3.5 Mb of novel transcribed sequence via significant alternative splicing and novel genes
出版年份 2013 全文链接
标题
Transcriptome analyses of the human retina identify unprecedented transcript diversity and 3.5 Mb of novel transcribed sequence via significant alternative splicing and novel genes
作者
关键词
RNA-Seq, Transcriptome, Inherited retinal degeneration, Retina, Novel genes, Alternative splicing
出版物
BMC GENOMICS
Volume 14, Issue 1, Pages 486
出版商
Springer Nature
发表日期
2013-07-18
DOI
10.1186/1471-2164-14-486
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- Transcriptome landscape of the human placenta
- (2012) Jinsil Kim et al. BMC GENOMICS
- The GENCODE v7 catalog of human long noncoding RNAs: Analysis of their gene structure, evolution, and expression
- (2012) T. Derrien et al. GENOME RESEARCH
- Race- and gender-related variation in natural killer p46 expression associated with differential anti-hepatitis c virus immunity
- (2012) Lucy Golden-Mason et al. HEPATOLOGY
- Landscape of transcription in human cells
- (2012) Sarah Djebali et al. NATURE
- Diabetic Retinopathy
- (2012) David A. Antonetti et al. NEW ENGLAND JOURNAL OF MEDICINE
- Exploring the Transcriptome of Ciliated Cells Using In Silico Dissection of Human Tissues
- (2012) Alexander E. Ivliev et al. PLoS One
- Alternative Splicing of RNA Triplets Is Often Regulated and Accelerates Proteome Evolution
- (2012) Robert K. Bradley et al. PLOS BIOLOGY
- Genome-wide RNA-seq analysis of human and mouse platelet transcriptomes
- (2011) J. W. Rowley et al. BLOOD
- Revealing the missing expressed genes beyond the human reference genome by RNA-Seq
- (2011) Geng Chen et al. BMC GENOMICS
- Conserved Function of lincRNAs in Vertebrate Embryonic Development despite Rapid Sequence Evolution
- (2011) Igor Ulitsky et al. CELL
- The GENCODE exome: sequencing the complete human exome
- (2011) Alison J Coffey et al. EUROPEAN JOURNAL OF HUMAN GENETICS
- Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses
- (2011) M. N. Cabili et al. GENES & DEVELOPMENT
- Estimation of alternative splicing variability in human populations
- (2011) M. Gonzalez-Porta et al. GENOME RESEARCH
- RNA-sequence analysis of human B-cells
- (2011) J. M. Toung et al. GENOME RESEARCH
- Genome-wide transcriptome analysis in murine neural retina using high-throughput RNA sequencing
- (2011) Ece D. Gamsiz et al. GENOMICS
- Transcriptome-wide sequencing reveals numerous APOBEC1 mRNA-editing targets in transcript 3′ UTRs
- (2011) Brad R Rosenberg et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Novel RPGR-ORF15 mutations in X-linked retinitis pigmentosa patients
- (2011) De-Kang Gan et al. NEUROSCIENCE LETTERS
- ENCODE whole-genome data in the UCSC Genome Browser: update 2012
- (2011) K. R. Rosenbloom et al. NUCLEIC ACIDS RESEARCH
- NCBI Reference Sequences (RefSeq): current status, new features and genome annotation policy
- (2011) K. D. Pruitt et al. NUCLEIC ACIDS RESEARCH
- Complete exon sequencing of all known Usher syndrome genes greatly improves molecular diagnosis
- (2011) Crystel Bonnet et al. Orphanet Journal of Rare Diseases
- Alternative Splicing and Nonsense-Mediated RNA Decay Contribute to the Regulation of SHOX Expression
- (2011) Claudia Durand et al. PLoS One
- Retinal dystrophy in Bardet–Biedl syndrome and related syndromic ciliopathies
- (2011) A. Mockel et al. PROGRESS IN RETINAL AND EYE RESEARCH
- A Splice-Site Mutation in a Retina-Specific Exon of BBS8 Causes Nonsyndromic Retinitis Pigmentosa
- (2010) S. Amer Riazuddin et al. AMERICAN JOURNAL OF HUMAN GENETICS
- The Genomic, Biochemical, and Cellular Responses of the Retina in Inherited Photoreceptor Degenerations and Prospects for the Treatment of These Disorders
- (2010) Alexa N. Bramall et al. Annual Review of Neuroscience
- Linc-ing Long Noncoding RNAs and Enhancer Function
- (2010) John S. Mattick DEVELOPMENTAL CELL
- Analysis of next-generation genomic data in cancer: accomplishments and challenges
- (2010) L. Ding et al. HUMAN MOLECULAR GENETICS
- Specific regulation of low-abundance transcript variants encoding human Acyl-CoA binding protein (ACBP) isoforms
- (2010) Inke Nitz et al. JOURNAL OF CELLULAR AND MOLECULAR MEDICINE
- Understanding the pathogenesis of Alzheimer’s disease: will RNA-Seq realize the promise of transcriptomics?
- (2010) Greg T. Sutherland et al. JOURNAL OF NEUROCHEMISTRY
- Transcriptome profiling in neurodegenerative disease
- (2010) Eliza Courtney et al. JOURNAL OF NEUROSCIENCE METHODS
- Understanding mechanisms underlying human gene expression variation with RNA sequencing
- (2010) Joseph K. Pickrell et al. NATURE
- Expansion of the eukaryotic proteome by alternative splicing
- (2010) Timothy W. Nilsen et al. NATURE
- LINCing chromatin remodeling to metastasis
- (2010) Carlo M Croce NATURE BIOTECHNOLOGY
- Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation
- (2010) Cole Trapnell et al. NATURE BIOTECHNOLOGY
- Exome sequencing identifies MLL2 mutations as a cause of Kabuki syndrome
- (2010) Sarah B Ng et al. NATURE GENETICS
- Genome-wide computational identification and manual annotation of human long noncoding RNA genes
- (2010) H. Jia et al. RNA
- Most “Dark Matter” Transcripts Are Associated With Known Genes
- (2010) Harm van Bakel et al. PLOS BIOLOGY
- Noisy Splicing Drives mRNA Isoform Diversity in Human Cells
- (2010) Joseph K. Pickrell et al. PLoS Genetics
- Current-generation high-throughput sequencing: deepening insights into mammalian transcriptomes
- (2009) B. J. Blencowe et al. GENES & DEVELOPMENT
- The consensus coding sequence (CCDS) project: Identifying a common protein-coding gene set for the human and mouse genomes
- (2009) K. D. Pruitt et al. GENOME RESEARCH
- Determining falling patterns by estimation of horizontal distance and height
- (2009) Yasuyoshi Yanagida et al. INTERNATIONAL JOURNAL OF LEGAL MEDICINE
- Mechanistic insights into Bardet-Biedl syndrome, a model ciliopathy
- (2009) Norann A. Zaghloul et al. JOURNAL OF CLINICAL INVESTIGATION
- Transcriptome sequencing to detect gene fusions in cancer
- (2009) Christopher A. Maher et al. NATURE
- Development and neurogenic potential of Müller glial cells in the vertebrate retina
- (2009) Ashutosh P. Jadhav et al. PROGRESS IN RETINAL AND EYE RESEARCH
- Alternative isoform regulation in human tissue transcriptomes
- (2008) Eric T. Wang et al. NATURE
- Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing
- (2008) Qun Pan et al. NATURE GENETICS
- A Global View of Gene Activity and Alternative Splicing by Deep Sequencing of the Human Transcriptome
- (2008) M. Sultan et al. SCIENCE
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