Toward an accurate prediction of inter-residue distances in proteins using 2D recursive neural networks

Three-Dimensional Structures of Membrane Proteins from Genomic Sequencing

(2012) Thomas A. Hopf et al.   CELL

PSICOV: precise structural contact prediction using sparse inverse covariance estimation on large multiple sequence alignments

(2011) David T. Jones et al.   BIOINFORMATICS

Protein 3D Structure Computed from Evolutionary Sequence Variation

(2011) Debora S. Marks et al.   PLoS One

Using NMR Chemical Shifts as Structural Restraints in Molecular Dynamics Simulations of Proteins

(2010) Paul Robustelli et al.   STRUCTURE

Fast and Accurate Predictions of Protein NMR Chemical Shifts from Interatomic Distances

(2009) Kai J. Kohlhoff et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Ab initio and template-based prediction of multi-class distance maps by two-dimensional recursive neural networks

(2009) Ian Walsh et al.   BMC STRUCTURAL BIOLOGY

A simple and fast heuristic for protein structure comparison

(2008) David A Pelta et al.   BMC BIOINFORMATICS

De novo protein structure generation from incomplete chemical shift assignments

(2008) Yang Shen et al.   JOURNAL OF BIOMOLECULAR NMR

A generative, probabilistic model of local protein structure

(2008) Wouter Boomsma et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A multi-template combination algorithm for protein comparative modeling

(2008) Jianlin Cheng   BMC STRUCTURAL BIOLOGY

LONG-RANGE INFORMATION AND PHYSICALITY CONSTRAINTS IMPROVE PREDICTED PROTEIN CONTACT MAPS

(2008) ALBERTO J. M. MARTIN et al.   Journal of Bioinformatics and Computational Biology