A fast algorithm for determining bounds and accurate approximate p-values of the rank product statistic for replicate experiments

Fold change rank ordering statistics: a new method for detecting differentially expressed genes

(2014) Doulaye Dembélé et al.   BMC BIOINFORMATICS

Global Meta-Analysis of Transcriptomics Studies

(2014) José Caldas et al.   PLoS One

Integrative framework for identification of key cell identity genes uncovers determinants of ES cell identity and homeostasis

(2014) S. Cinghu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Meta-analysis on blood transcriptomic studies identifies consistently coexpressed protein-protein interaction modules as robust markers of human aging

(2013) Erik B. van den Akker et al.   AGING CELL

Meta-analysis methods for combining multiple expression profiles: comparisons, statistical characterization and an application guideline

(2013) Lun-Ching Chang et al.   BMC BIOINFORMATICS

The exact probability distribution of the rank product statistics for replicated experiments

(2013) Rob Eisinga et al.   FEBS LETTERS

A linear classifier based on entity recognition tools and a statistical approach to method extraction in the protein-protein interaction literature

(2011) Anália Lourenço et al.   BMC BIOINFORMATICS

Consistent Differential Expression Pattern (CDEP) on microarray to identify genes related to metastatic behavior

(2011) Lam C Tsoi et al.   BMC BIOINFORMATICS

Metabolomic correlation-network modules in Arabidopsis based on a graph-clustering approach

(2011) Atsushi Fukushima et al.   BMC Systems Biology

Comments on the rank product method for analyzing replicated experiments

(2010) James A. Koziol   FEBS LETTERS

Fewer permutations, more accurate P-values

(2009) Theo A. Knijnenburg et al.   BIOINFORMATICS

The Yeast Vacuolar Membrane Proteome

(2008) Elena Wiederhold et al.   MOLECULAR & CELLULAR PROTEOMICS