Constructing gene regulatory networks for long term photosynthetic light acclimation in Arabidopsis thaliana

Global screening of potential Candida albicans biofilm-related transcription factors via network comparison

(2010) Yu-Chao Wang et al.   BMC BIOINFORMATICS

Improved Reconstruction of In Silico Gene Regulatory Networks by Integrating Knockout and Perturbation Data

(2010) Kevin Y. Yip et al.   PLoS One

Reconstruct gene regulatory network using slice pattern model

(2009) Yadong Wang et al.   BMC GENOMICS

From gene expression to gene regulatory networks in Arabidopsis thaliana

(2009) Chris J Needham et al.   BMC Systems Biology

Arabidopsis STN7 Kinase Provides a Link between Short- and Long-Term Photosynthetic Acclimation

(2009) P. Pesaresi et al.   PLANT CELL

Dynamic Plastid Redox Signals Integrate Gene Expression and Metabolism to Induce Distinct Metabolic States in Photosynthetic Acclimation in Arabidopsis

(2009) K. Brautigam et al.   PLANT CELL

PlantPAN: Plant promoter analysis navigator, for identifying combinatorial cis-regulatory elements with distance constraint in plant gene groups

(2008) Wen-Chi Chang et al.   BMC GENOMICS

A systems biology approach to construct the gene regulatory network of systemic inflammation via microarray and databases mining

(2008) Bor-Sen Chen et al.   BMC Medical Genomics

Construction of a cancer-perturbed protein-protein interaction network for discovery of apoptosis drug targets

(2008) Liang-Hui Chu et al.   BMC Systems Biology

Photosynthetic acclimation: State transitions and adjustment of photosystem stoichiometry - functional relationships between short-term and long-term light quality acclimation in plants

(2008) Lars Dietzel et al.   FEBS Journal

Type B Response Regulators of Arabidopsis Play Key Roles in Cytokinin Signaling and Plant Development

(2008) R. D. Argyros et al.   PLANT CELL

The long-term response to fluctuating light quality is an important and distinct light acclimation mechanism that supports survival of Arabidopsis thaliana under low light conditions

(2008) Raik Wagner et al.   PLANTA