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Inferring pandemic growth rates from sequence data

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Improving the Accuracy of Demographic and Molecular Clock Model Comparison While Accommodating Phylogenetic Uncertainty

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Bayesian Phylogenetics with BEAUti and the BEAST 1.7

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BEAGLE: An Application Programming Interface and High-Performance Computing Library for Statistical Phylogenetics

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Inference for Nonlinear Epidemiological Models Using Genealogies and Time Series

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Estimated epidemiologic parameters and morbidity associated with pandemic H1N1 influenza

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Phylodynamics of Infectious Disease Epidemics

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Estimation of the reproductive number and the serial interval in early phase of the 2009 influenza A/H1N1 pandemic in the USA

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Smooth Skyride through a Rough Skyline: Bayesian Coalescent-Based Inference of Population Dynamics

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Mathematical models of infectious disease transmission

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