Carbohydrate Catabolism in Phaeobacter inhibens DSM 17395, a Member of the Marine Roseobacter Clade

A metabolite-centric view on flux distributions in genome-scale metabolic models

(2013) S Riemer et al.   BMC Systems Biology

Pathways and substrate-specific regulation of amino acid degradation inPhaeobacter inhibens DSM 17395 (archetype of the marineRoseobacterclade)

(2013) Katharina Drüppel et al.   ENVIRONMENTAL MICROBIOLOGY

Phaeobacter leonis sp. nov., an alphaproteobacterium from Mediterranean Sea sediments

(2013) F. Gaboyer et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Molecular and phenotypic analyses reveal the non-identity of the Phaeobacter gallaeciensis type strain deposits CIP 105210T and DSM 17395

(2013) N. Buddruhs et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Subcellular protein localization (cell envelope) inPhaeobacter inhibensDSM 17395

(2013) Sebastian Koßmehl et al.   PROTEOMICS

Dynamics of amino acid utilization inPhaeobacter inhibensDSM 17395

(2013) Hajo Zech et al.   PROTEOMICS

Adaptation ofPhaeobacter inhibensDSM 17395 to growth with complex nutrients

(2013) Hajo Zech et al.   PROTEOMICS

Phaeobacter gallaeciensis genomes from globally opposite locations reveal high similarity of adaptation to surface life

(2012) Sebastian Thole et al.   ISME Journal

Database resources of the National Center for Biotechnology Information

(2012)   NUCLEIC ACIDS RESEARCH

BRENDA in 2013: integrated reactions, kinetic data, enzyme function data, improved disease classification: new options and contents in BRENDA

(2012) Ida Schomburg et al.   NUCLEIC ACIDS RESEARCH

EnzymeDetector: an integrated enzyme function prediction tool and database

(2011) Susanne Quester et al.   BMC BIOINFORMATICS

Tropodithietic Acid Production in Phaeobacter gallaeciensis Is Regulated by N-Acyl Homoserine Lactone-Mediated Quorum Sensing

(2011) M. Berger et al.   JOURNAL OF BACTERIOLOGY

Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega

(2011) F. Sievers et al.   Molecular Systems Biology

Reorganizing the protein space at the Universal Protein Resource (UniProt)

(2011)   NUCLEIC ACIDS RESEARCH

IMG: the integrated microbial genomes database and comparative analysis system

(2011) V. M. Markowitz et al.   NUCLEIC ACIDS RESEARCH

The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases

(2011) R. Caspi et al.   NUCLEIC ACIDS RESEARCH

KEGG for integration and interpretation of large-scale molecular data sets

(2011) M. Kanehisa et al.   NUCLEIC ACIDS RESEARCH

Biological versus technical variability in 2-D DIGE experiments with environmental bacteria

(2011) Hajo Zech et al.   PROTEOMICS

Hidden Markov model speed heuristic and iterative HMM search procedure

(2010) L Steven Johnson et al.   BMC BIOINFORMATICS

Genome characteristics of a generalist marine bacterial lineage

(2010) Ryan J Newton et al.   ISME Journal

Identification and Regulation of the N-Acetylglucosamine Utilization Pathway of the Plant Pathogenic Bacterium Xanthomonas campestris pv. campestris

(2010) A. Boulanger et al.   JOURNAL OF BACTERIOLOGY

A new bioinformatics analysis tools framework at EMBL-EBI

(2010) M. Goujon et al.   NUCLEIC ACIDS RESEARCH

Metabolic fluxes in the central carbon metabolism of Dinoroseobacter shibae and Phaeobacter gallaeciensis, two members of the marine Roseobacter clade

(2009) Tobias Fürch et al.   BMC MICROBIOLOGY

Transporter genes expressed by coastal bacterioplankton in response to dissolved organic carbon

(2009) Rachel S. Poretsky et al.   ENVIRONMENTAL MICROBIOLOGY

Phaeobacter caeruleus sp. nov., a blue-coloured, colony-forming bacterium isolated from a marine electroactive biofilm

(2009) I. Vandecandelaere et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Growth phase-dependent global protein and metabolite profiles ofPhaeobacter gallaeciensisstrain DSM 17395, a member of the marineRoseobacter-clade

(2009) Hajo Zech et al.   PROTEOMICS

Phaeobacter arcticus sp. nov., a psychrophilic bacterium isolated from the Arctic

(2008) D.-C. Zhang et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY