Metagenomic Analysis of Crohnʼs Disease Patients Identifies Changes in the Virome and Microbiome Related to Disease Status and Therapy, and Detects Potential Interactions and Biomarkers
出版年份 2015 全文链接
标题
Metagenomic Analysis of Crohnʼs Disease Patients Identifies Changes in the Virome and Microbiome Related to Disease Status and Therapy, and Detects Potential Interactions and Biomarkers
作者
关键词
-
出版物
INFLAMMATORY BOWEL DISEASES
Volume 21, Issue 11, Pages 2515-2532
出版商
Oxford University Press (OUP)
发表日期
2015-08-07
DOI
10.1097/mib.0000000000000549
参考文献
相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。- The Treatment-Naive Microbiome in New-Onset Crohn’s Disease
- (2014) Dirk Gevers et al. Cell Host & Microbe
- The Microbiome in Inflammatory Bowel Disease: Current Status and the Future Ahead
- (2014) Aleksandar D. Kostic et al. GASTROENTEROLOGY
- Dysregulation of mucosal immune response in pathogenesis of inflammatory bowel disease
- (2014) Xiao-Rong Xu WORLD JOURNAL OF GASTROENTEROLOGY
- Temporal Response of the Human Virome to Immunosuppression and Antiviral Therapy
- (2013) Iwijn De Vlaminck et al. CELL
- Semisynthetic Diet Ameliorates Crohn’s Disease–Like Ileitis in TNFΔARE/WT Mice Through Antigen-Independent Mechanisms of Gluten
- (2013) Stefan J. Wagner et al. INFLAMMATORY BOWEL DISEASES
- New insights on the pathomechanisms of inflammatory bowel disease
- (2013) Murdani Abdullah et al. Journal of Digestive Diseases
- Humans Have Antibodies against a Plant Virus: Evidence from Tobacco Mosaic Virus
- (2013) Ruolan Liu et al. PLoS One
- Rapid evolution of the human gut virome
- (2013) S. Minot et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Importance of prophages to evolution and virulence of bacterial pathogens
- (2013) Louis-Charles Fortier et al. Virulence
- Human Enterovirus Species B in Ileocecal Crohn’s Disease
- (2013) Niklas Nyström et al. Clinical and Translational Gastroenterology
- Study of the Viral and Microbial Communities Associated With Crohn’s Disease: A Metagenomic Approach
- (2013) Vicente Pérez-Brocal et al. Clinical and Translational Gastroenterology
- Shiga Toxin-Producing Escherichia coli O104:H4: a New Challenge for Microbiology
- (2012) Maite Muniesa et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Fast gapped-read alignment with Bowtie 2
- (2012) Ben Langmead et al. NATURE METHODS
- The gut microbiota in IBD
- (2012) Chaysavanh Manichanh et al. Nature Reviews Gastroenterology & Hepatology
- Going viral: next-generation sequencing applied to phage populations in the human gut
- (2012) Alejandro Reyes et al. NATURE REVIEWS MICROBIOLOGY
- Increased Prevalence of Anellovirus in Pediatric Patients with Fever
- (2012) Erin McElvania TeKippe et al. PLoS One
- Diversity and Abundance of Single-Stranded DNA Viruses in Human Feces
- (2011) Min-Soo Kim et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Quality control and preprocessing of metagenomic datasets
- (2011) R. Schmieder et al. BIOINFORMATICS
- The human gut virome: Inter-individual variation and dynamic response to diet
- (2011) S. Minot et al. GENOME RESEARCH
- Antibiotic Resistance Genes in the Bacteriophage DNA Fraction of Environmental Samples
- (2011) Marta Colomer-Lluch et al. PLoS One
- Viruses, Autophagy Genes, and Crohn’s Disease
- (2011) Vanessa M. Hubbard et al. Viruses-Basel
- Metagenomic biomarker discovery and explanation
- (2011) Nicola Segata et al. GENOME BIOLOGY
- Cytomegalovirus Infection Increases the Risk for Inflammatory Bowel Disease
- (2010) Robert C. Verdonk et al. AMERICAN JOURNAL OF PATHOLOGY
- Search and clustering orders of magnitude faster than BLAST
- (2010) Robert C. Edgar BIOINFORMATICS
- Virus-Plus-Susceptibility Gene Interaction Determines Crohn's Disease Gene Atg16L1 Phenotypes in Intestine
- (2010) Ken Cadwell et al. CELL
- Viruses in the faecal microbiota of monozygotic twins and their mothers
- (2010) Alejandro Reyes et al. NATURE
- QIIME allows analysis of high-throughput community sequencing data
- (2010) J Gregory Caporaso et al. NATURE METHODS
- Gut Microbiota in Health and Disease
- (2010) Inna Sekirov et al. PHYSIOLOGICAL REVIEWS
- Pepper Mild Mottle Virus, a Plant Virus Associated with Specific Immune Responses, Fever, Abdominal Pains, and Pruritus in Humans
- (2010) Philippe Colson et al. PLoS One
- Pepper Mild Mottle Virus as an Indicator of Fecal Pollution
- (2009) K. Rosario et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities
- (2009) P. D. Schloss et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- PyNAST: a flexible tool for aligning sequences to a template alignment
- (2009) J. G. Caporaso et al. BIOINFORMATICS
- Epstein-Barr Virus-Related Diarrhea or Exacerbation of Inflammatory Bowel Disease: Diagnostic Dilemma
- (2009) I. Weinberg et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Parvovirus B19 Infection Localized in the Intestinal Mucosa and Associated with Severe Inflammatory Bowel Disease
- (2009) L. Pironi et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Gastrointestinal Norovirus Infection Associated With Exacerbation of Inflammatory Bowel Disease
- (2009) Raheel R Khan et al. JOURNAL OF PEDIATRIC GASTROENTEROLOGY AND NUTRITION
- ACLAME: A CLAssification of Mobile genetic Elements, update 2010
- (2009) Raphaël Leplae et al. NUCLEIC ACIDS RESEARCH
- Microbial Influences in Inflammatory Bowel Diseases
- (2008) R. Balfour Sartor GASTROENTEROLOGY
- Viral diversity and dynamics in an infant gut
- (2008) Mya Breitbart et al. RESEARCH IN MICROBIOLOGY
Become a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get StartedAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started