Immunomics of the koala (Phascolarctos cinereus)

The koala immunological toolkit: sequence identification and comparison of key markers of the koala (Phascolarctos cinereus) immune response

(2014) Katrina Morris et al.   AUSTRALIAN JOURNAL OF ZOOLOGY

A transcriptome resource for the koala (Phascolarctos cinereus): insights into koala retrovirus transcription and sequence diversity

(2014) Matthew Hobbs et al.   BMC GENOMICS

Evolution of nonclassical MHC-dependent invariant T cells

(2014) Eva-Stina Edholm et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

MHC class II diversity of koala (Phascolarctos cinereus) populations across their range

(2014) Q Lau et al.   HEREDITY

Characterisation of non-classical MHC class I genes in the Tasmanian devil (Sarcophilus harrisii)

(2014) Yuanyuan Cheng et al.   IMMUNOGENETICS

Parallel Histories of Horizontal Gene Transfer Facilitated Extreme Reduction of Endosymbiont Genomes in Sap-Feeding Insects

(2014) Daniel B. Sloan et al.   MOLECULAR BIOLOGY AND EVOLUTION

SNP Discovery in the Transcriptome of White Pacific Shrimp Litopenaeus vannamei by Next Generation Sequencing

(2014) Yang Yu et al.   PLoS One

Vaccination of koalas (Phascolarctos cinereus) with a recombinant chlamydial major outer membrane protein adjuvanted with poly I:C, a host defense peptide and polyphosphazine, elicits strong and long lasting cellular and humoral immune responses

(2014) Shahneaz Ali Khan et al.   VACCINE

Identification of MHCII variants associated with chlamydial disease in the koala (Phascolarctos cinereus)

(2014) Quintin Lau et al.   PeerJ

Marsupial immunology bounding ahead

(2013) Katherine Belov et al.   AUSTRALIAN JOURNAL OF ZOOLOGY

A reference transcriptome and inferred proteome for the salamander Notophthalmus viridescens

(2013) Ilgar Abdullayev et al.   EXPERIMENTAL CELL RESEARCH

Heterogeneity of koala retrovirus isolates

(2013) Sayumi Shimode et al.   FEBS LETTERS

Molecular characterisation and expression analysis of Interferon gamma in response to natural Chlamydia infection in the koala, Phascolarctos cinereus

(2013) Marina Mathew et al.   GENE

Construction and Characterization of an Infectious Molecular Clone of Koala Retrovirus

(2013) T. Shojima et al.   JOURNAL OF VIROLOGY

Of contigs and quagmires: next-generation sequencing pitfalls associated with transcriptomic studies

(2013) J. Andrew DeWoody et al.   Molecular Ecology Resources

Preliminary Characterisation of Tumor Necrosis Factor Alpha and Interleukin-10 Responses to Chlamydia pecorum Infection in the Koala (Phascolarctos cinereus)

(2013) Marina Mathew et al.   PLoS One

An exogenous retrovirus isolated from koalas with malignant neoplasias in a US zoo

(2013) W. Xu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Diversity of MHC class II DAB1 in the koala (Phascolarctos cinereus)

(2012) Sarah E. Jobbins et al.   AUSTRALIAN JOURNAL OF ZOOLOGY

Mutual mate choice in the potbellied seahorse (Hippocampus abdominalis)

(2012) Angela Bahr et al.   BEHAVIORAL ECOLOGY

Sex-specific selection for MHC variability in Alpine chamois

(2012) Helmut Schaschl et al.   BMC EVOLUTIONARY BIOLOGY

Antigen-presenting genes and genomic copy number variations in the Tasmanian devil MHC

(2012) Yuanyuan Cheng et al.   BMC GENOMICS

Genome Sequencing and Analysis of the Tasmanian Devil and Its Transmissible Cancer

(2012) Elizabeth P. Murchison et al.   CELL

A review of complementary mechanisms which protect the developing marsupial pouch young

(2012) M.J. Edwards et al.   DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY

Phylogenetic, genomic organization and expression analysis of hydrophobin genes in the ectomycorrhizal basidiomycete Laccaria bicolor

(2012) Jonathan M. Plett et al.   FUNGAL GENETICS AND BIOLOGY

Characterisation of four major histocompatibility complex class II genes of the koala (Phascolarctos cinereus)

(2012) Quintin Lau et al.   IMMUNOGENETICS

One Hundred Twenty Years of Koala Retrovirus Evolution Determined from Museum Skins

(2012) M. C. Avila-Arcos et al.   MOLECULAR BIOLOGY AND EVOLUTION

Genetic variation in Toll-like receptors and disease susceptibility

(2012) Mihai G Netea et al.   NATURE IMMUNOLOGY

Vaccination of healthy and diseased koalas (Phascolarctos cinereus) with a Chlamydia pecorum multi-subunit vaccine: Evaluation of immunity and pathology

(2012) Avinash Kollipara et al.   VACCINE

ProtTest 3: fast selection of best-fit models of protein evolution

(2011) Diego Darriba et al.   BIOINFORMATICS

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

(2011) Bo Li et al.   BMC BIOINFORMATICS

The tammar wallaby major histocompatibility complex shows evidence of past genomic instability

(2011) Hannah V Siddle et al.   BMC GENOMICS

Immunome database for marsupials and monotremes

(2011) Emily SW Wong et al.   BMC IMMUNOLOGY

Pathogen Recognition by the Innate Immune System

(2011) Himanshu Kumar et al.   INTERNATIONAL REVIEWS OF IMMUNOLOGY

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

Integrative genomics viewer

(2011) James T Robinson et al.   NATURE BIOTECHNOLOGY

Fast Identification and Removal of Sequence Contamination from Genomic and Metagenomic Datasets

(2011) Robert Schmieder et al.   PLoS One

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

(2010) A. McKenna et al.   GENOME RESEARCH

The Tasmanian Devil Transcriptome Reveals Schwann Cell Origins of a Clonally Transmissible Cancer

(2010) E. P. Murchison et al.   SCIENCE

Management measures to control a feline leukemia virus outbreak in the endangered Iberian lynx

(2009) G. López et al.   ANIMAL CONSERVATION

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Jalview Version 2--a multiple sequence alignment editor and analysis workbench

(2009) A. M. Waterhouse et al.   BIOINFORMATICS

Diverse MHC IIB allele repertoire increases parasite resistance and body condition in the Long-tailed giant rat (Leopoldamys sabanus)

(2009) Tobias L Lenz et al.   BMC EVOLUTIONARY BIOLOGY

Origin and evolution of the RIG-I like RNA helicase gene family

(2009) Jun Zou et al.   BMC EVOLUTIONARY BIOLOGY

MHC-linked and un-linked class I genes in the wallaby

(2009) Hannah V Siddle et al.   BMC GENOMICS

Extremely high MHC class I variation in a population of a long-distance migrant, the Scarlet Rosefinch (Carpodacus erythrinus)

(2009) M. Promerová et al.   IMMUNOGENETICS

Condition-dependent mate choice and a reproductive disadvantage for MHC-divergent male tiger salamanders

(2009) DAVID H. BOS et al.   MOLECULAR ECOLOGY

MHC-based mate choice combines good genes and maintenance of MHC polymorphism

(2009) C. EIZAGUIRRE et al.   MOLECULAR ECOLOGY

CD14 and TLR4 are expressed early in tammar (Macropus eugenii) neonate development

(2008) K. A. Daly et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Zinc  2-Glycoprotein: A Multidisciplinary Protein

(2008) Md. I. Hassan et al.   MOLECULAR CANCER RESEARCH