An epigenetic mechanism for cavefish eye degeneration

Biallelic Mutations in GNB3 Cause a Unique Form of Autosomal-Recessive Congenital Stationary Night Blindness

(2016) Ajoy Vincent et al.   AMERICAN JOURNAL OF HUMAN GENETICS

The ciliary marginal zone of the zebrafish retina: clonal and time-lapse analysis of a continuously growing tissue

(2016) Yinan Wan et al.   DEVELOPMENT

Transcription factors as readers and effectors of DNA methylation

(2016) Heng Zhu et al.   NATURE REVIEWS GENETICS

Recessive Retinopathy Consequent on Mutant G-Protein β Subunit 3 (GNB3)

(2016) Gavin Arno et al.   JAMA Ophthalmology

The rise ofAstyanaxcavefish

(2015) Joshua B. Gross et al.   DEVELOPMENTAL DYNAMICS

Overlapping Requirements for Tet2 and Tet3 in Normal Development and Hematopoietic Stem Cell Emergence

(2015) Cheng Li et al.   Cell Reports

The energetic cost of vision and the evolution of eyeless Mexican cavefish

(2015) D. Moran et al.   Science Advances

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Lens defects inAstyanax mexicanusCavefish: Evolution of crystallins and a role for alphaA-crystallin

(2014) Hélène Hinaux et al.   Developmental Neurobiology

Astyanax Transgenesis and Husbandry: How Cavefish Enters the Laboratory

(2014) Yannick Elipot et al.   Zebrafish

The cavefish genome reveals candidate genes for eye loss

(2014) Suzanne E. McGaugh et al.   Nature Communications

Expression of the de novo DNA methyltransferases (dnmt3-dnmt8) during zebrafish lens development

(2013) Pawat Seritrakul et al.   DEVELOPMENTAL DYNAMICS

De Novo Sequencing of Astyanax mexicanus Surface Fish and Pachón Cavefish Transcriptomes Reveals Enrichment of Mutations in Cavefish Putative Eye Genes

(2013) Hélène Hinaux et al.   PLoS One

Mining cancer methylomes: prospects and challenges

(2013) Clare Stirzaker et al.   TRENDS IN GENETICS

DNA methylation profiling in the clinic: applications and challenges

(2012) Holger Heyn et al.   NATURE REVIEWS GENETICS

Bismark: a flexible aligner and methylation caller for Bisulfite-Seq applications

(2011) Felix Krueger et al.   BIOINFORMATICS

Genome sequencing reveals insights into physiology and longevity of the naked mole rat

(2011) Eun Bae Kim et al.   NATURE

Tet Proteins Can Convert 5-Methylcytosine to 5-Formylcytosine and 5-Carboxylcytosine

(2011) S. Ito et al.   SCIENCE

Molecular and Enzymatic Profiles of Mammalian DNA Methyltransferases: Structures and Targets for Drugs

(2010) F. Xu et al.   CURRENT MEDICINAL CHEMISTRY

Role of Tet proteins in 5mC to 5hmC conversion, ES-cell self-renewal and inner cell mass specification

(2010) Shinsuke Ito et al.   NATURE

Transcriptional regulation of photoreceptor development and homeostasis in the mammalian retina

(2010) Anand Swaroop et al.   NATURE REVIEWS NEUROSCIENCE

DNA methylation landscapes: provocative insights from epigenomics

(2008) Miho M. Suzuki et al.   NATURE REVIEWS GENETICS

QUMA: quantification tool for methylation analysis

(2008) Y. Kumaki et al.   NUCLEIC ACIDS RESEARCH

Nutritional Control of Reproductive Status in Honeybees via DNA Methylation

(2008) R. Kucharski et al.   SCIENCE