De Novo Sequencing of Astyanax mexicanus Surface Fish and Pachón Cavefish Transcriptomes Reveals Enrichment of Mutations in Cavefish Putative Eye Genes

Gene flow and population structure in the Mexican blind cavefish complex (Astyanax mexicanus)

(2012) Martina Bradic et al.   BMC EVOLUTIONARY BIOLOGY

Evaluating Characteristics of De Novo Assembly Software on 454 Transcriptome Data: A Simulation Approach

(2012) Marvin Mundry et al.   PLoS One

Quality control and preprocessing of metagenomic datasets

(2011) R. Schmieder et al.   BIOINFORMATICS

Evolutionary history of Otophysi (Teleostei), a major clade of the modern freshwater fishes: Pangaean origin and Mesozoic radiation

(2011) Masanori Nakatani et al.   BMC EVOLUTIONARY BIOLOGY

Restoring eye size in Astyanax mexicanus blind cavefish embryos through modulation of the Shh and Fgf8 forebrain organising centres

(2011) K. Pottin et al.   DEVELOPMENT

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Ensembl 2012

(2011) P. Flicek et al.   NUCLEIC ACIDS RESEARCH

A Developmental Staging Table for Astyanax mexicanus Surface Fish and Pachón Cavefish

(2011) Hélène Hinaux et al.   Zebrafish

Cave colonization without fasting capacities: An example with the fish Astyanax fasciatus mexicanus

(2010) K. Salin et al.   COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY A-MOLECULAR & INTEGRATIVE PHYSIOLOGY

Evolution of a Behavioral Shift Mediated by Superficial Neuromasts Helps Cavefish Find Food in Darkness

(2010) Masato Yoshizawa et al.   CURRENT BIOLOGY

Pleiotropy and eye degeneration in cavefish

(2010) W R Jeffery   HEREDITY

Genes, modules and the evolution of cave fish

(2010) H Wilkens   HEREDITY

ZFIN: enhancements and updates to the zebrafish model organism database

(2010) Y. Bradford et al.   NUCLEIC ACIDS RESEARCH

CDD: a Conserved Domain Database for the functional annotation of proteins

(2010) A. Marchler-Bauer et al.   NUCLEIC ACIDS RESEARCH

Adaptive Evolution of Pelvic Reduction in Sticklebacks by Recurrent Deletion of a Pitx1 Enhancer

(2009) Y. F. Chan et al.   SCIENCE

A Novel Role for Mc1r in the Parallel Evolution of Depigmentation in Independent Populations of the Cavefish Astyanax mexicanus

(2009) Joshua B. Gross et al.   PLoS Genetics