Increased diversity of peptidic natural products revealed by modification-tolerant database search of mass spectra
出版年份 2018 全文链接
标题
Increased diversity of peptidic natural products revealed by modification-tolerant database search of mass spectra
作者
关键词
-
出版物
Nature Microbiology
Volume 3, Issue 3, Pages 319-327
出版商
Springer Nature
发表日期
2018-01-19
DOI
10.1038/s41564-017-0094-2
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- MSFragger: ultrafast and comprehensive peptide identification in mass spectrometry–based proteomics
- (2017) Andy T Kong et al. NATURE METHODS
- Digitizing mass spectrometry data to explore the chemical diversity and distribution of marine cyanobacteria and algae
- (2017) Tal Luzzatto-Knaan et al. eLife
- Dereplication, sequencing and identification of peptidic natural products: from genome mining to peptidogenomics to spectral networks
- (2016) Hosein Mohimani et al. NATURAL PRODUCT REPORTS
- Sharing and community curation of mass spectrometry data with Global Natural Products Social Molecular Networking
- (2016) Mingxun Wang et al. NATURE BIOTECHNOLOGY
- Dereplication of peptidic natural products through database search of mass spectra
- (2016) Hosein Mohimani et al. Nature Chemical Biology
- IMG-ABC: new features for bacterial secondary metabolism analysis and targeted biosynthetic gene cluster discovery in thousands of microbial genomes
- (2016) Michalis Hadjithomas et al. NUCLEIC ACIDS RESEARCH
- ClassyFire: automated chemical classification with a comprehensive, computable taxonomy
- (2016) Yannick Djoumbou Feunang et al. Journal of Cheminformatics
- Indexing the Pseudomonas specialized metabolome enabled the discovery of poaeamide B and the bananamides
- (2016) Don D. Nguyen et al. Nature Microbiology
- Molecular Networking and Pattern-Based Genome Mining Improves Discovery of Biosynthetic Gene Clusters and their Products from Salinispora Species
- (2015) Katherine R. Duncan et al. CHEMISTRY & BIOLOGY
- A new antibiotic kills pathogens without detectable resistance
- (2015) Losee L. Ling et al. NATURE
- Minimum Information about a Biosynthetic Gene cluster
- (2015) Marnix H Medema et al. Nature Chemical Biology
- Illuminating the dark matter in metabolomics: Fig. 1.
- (2015) Ricardo R. da Silva et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Automated Genome Mining of Ribosomal Peptide Natural Products
- (2014) Hosein Mohimani et al. ACS Chemical Biology
- Isolation and structural determination of a new hydrophobic peptide venepeptide from Streptomyces venezuelae
- (2014) Shinya Kodani et al. JOURNAL OF ANTIBIOTICS
- NRPquest: Coupling Mass Spectrometry and Genome Mining for Nonribosomal Peptide Discovery
- (2014) Hosein Mohimani et al. JOURNAL OF NATURAL PRODUCTS
- Image-Based 384-Well High-Throughput Screening Method for the Discovery of Skyllamycins A to C as Biofilm Inhibitors and Inducers of Biofilm Detachment in Pseudomonas aeruginosa
- (2013) Gabriel Navarro et al. ANTIMICROBIAL AGENTS AND CHEMOTHERAPY
- Surugamides A–E, Cyclic Octapeptides with Four d-Amino Acid Residues, from a Marine Streptomyces sp.: LC–MS-Aided Inspection of Partial Hydrolysates for the Distinction of d- and l-Amino Acid Residues in the Sequence
- (2013) Kentaro Takada et al. JOURNAL OF ORGANIC CHEMISTRY
- A New Approach to Evaluating Statistical Significance of Spectral Identifications
- (2013) Hosein Mohimani et al. JOURNAL OF PROTEOME RESEARCH
- Discovery and development of first in class antifungal caspofungin (CANCIDAS®)—A case study
- (2013) James M. Balkovec et al. NATURAL PRODUCT REPORTS
- Ribosomally synthesized and post-translationally modified peptide natural products: overview and recommendations for a universal nomenclature
- (2012) Paul G. Arnison et al. NATURAL PRODUCT REPORTS
- StreptomeDB: a resource for natural compounds isolated from Streptomyces species
- (2012) X. Lucas et al. NUCLEIC ACIDS RESEARCH
- Mass spectral molecular networking of living microbial colonies
- (2012) J. Watrous et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Dereplicating nonribosomal peptides using an informatic search algorithm for natural products (iSNAP) discovery
- (2012) A. Ibrahim et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Small Molecule Databases and Chemical Descriptors Useful in Chemoinformatics: An Overview
- (2011) Rafael Gozalbes et al. COMBINATORIAL CHEMISTRY & HIGH THROUGHPUT SCREENING
- Multiplex De Novo Sequencing of Peptide Antibiotics
- (2011) Hosein Mohimani et al. JOURNAL OF COMPUTATIONAL BIOLOGY
- Cycloquest: Identification of Cyclopeptides via Database Search of Their Mass Spectra against Genome Databases
- (2011) Hosein Mohimani et al. JOURNAL OF PROTEOME RESEARCH
- NRPSpredictor2—a web server for predicting NRPS adenylation domain specificity
- (2011) Marc Röttig et al. NUCLEIC ACIDS RESEARCH
- antiSMASH: rapid identification, annotation and analysis of secondary metabolite biosynthesis gene clusters in bacterial and fungal genome sequences
- (2011) Marnix H. Medema et al. NUCLEIC ACIDS RESEARCH
- The hidden diversity of ribosomal peptide natural products
- (2010) Eric W Schmidt BMC BIOLOGY
- Dereplication and de novo sequencing of nonribosomal peptides
- (2009) Julio Ng et al. NATURE METHODS
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationPublish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn More