“Candidatus Paraporphyromonas polyenzymogenes” encodes multi-modular cellulases linked to the type IX secretion system
出版年份 2018 全文链接
标题
“Candidatus Paraporphyromonas polyenzymogenes” encodes multi-modular cellulases linked to the type IX secretion system
作者
关键词
Type IX secretion system, Carbohydrate-active enzymes, Cellulases, <em class=EmphasisTypeItalic >Bacteroidetes</em>
出版物
Microbiome
Volume 6, Issue 1, Pages -
出版商
Springer Nature
发表日期
2018-03-01
DOI
10.1186/s40168-018-0421-8
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Outer membrane vesicles from Fibrobacter succinogenes S85 contain an array of carbohydrate-active enzymes with versatile polysaccharide-degrading capacity
- (2017) Magnus Ø. Arntzen et al. ENVIRONMENTAL MICROBIOLOGY
- Polysaccharide Utilization Loci: Fueling Microbial Communities
- (2017) Julie M. Grondin et al. JOURNAL OF BACTERIOLOGY
- Recovery of nearly 8,000 metagenome-assembled genomes substantially expands the tree of life
- (2017) Donovan H. Parks et al. Nature Microbiology
- Metabolic networks for nitrogen utilization in Prevotella ruminicola 23
- (2017) Jong Nam Kim et al. Scientific Reports
- Periplasmic Cytophaga hutchinsonii Endoglucanases Are Required for Use of Crystalline Cellulose as the Sole Source of Carbon and Energy
- (2016) Yongtao Zhu et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- PRED-TMBB2: improved topology prediction and detection of beta-barrel outer membrane proteins
- (2016) Konstantinos D. Tsirigos et al. BIOINFORMATICS
- A polysaccharide utilization locus from Flavobacterium johnsoniae enables conversion of recalcitrant chitin
- (2016) Johan Larsbrink et al. Biotechnology for Biofuels
- Natural diversity of cellulases, xylanases, and chitinases in bacteria
- (2016) Darrian Talamantes et al. Biotechnology for Biofuels
- The Perseus computational platform for comprehensive analysis of (prote)omics data
- (2016) Stefka Tyanova et al. NATURE METHODS
- The outer-membrane export signal of Porphyromonas gingivalis type IX secretion system (T9SS) is a conserved C-terminal β-sandwich domain
- (2016) Iñaki de Diego et al. Scientific Reports
- Genomic characterization of the uncultured Bacteroidales family S24-7 inhabiting the guts of homeothermic animals
- (2016) Kate L. Ormerod et al. Microbiome
- Identification of protein secretion systems in bacterial genomes
- (2016) Sophie S. Abby et al. Scientific Reports
- Expression and characteristics of a Ca2+-dependent endoglucanase from Cytophaga hutchinsonii
- (2015) Cong Zhang et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- Outer membrane proteins related to SusC and SusD are not required for Cytophaga hutchinsonii cellulose utilization
- (2015) Yongtao Zhu et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- Flavobacterium gliding motility and the type IX secretion system
- (2015) Mark J McBride et al. CURRENT OPINION IN MICROBIOLOGY
- KEGG as a reference resource for gene and protein annotation
- (2015) Minoru Kanehisa et al. NUCLEIC ACIDS RESEARCH
- Structural Features of a Bacteroidetes-Affiliated Cellulase Linked with a Polysaccharide Utilization Locus
- (2015) A.E. Naas et al. Scientific Reports
- Evaluating Models of Cellulose Degradation by Fibrobacter succinogenes S85
- (2015) Meagan C. Burnet et al. PLoS One
- Characterization of a multi-function processive endoglucanase CHU_2103 from Cytophaga hutchinsonii
- (2014) Cong Zhang et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
- (2014) Alexandros Stamatakis BIOINFORMATICS
- Inference of phenotype-defining functional modules of protein families for microbial plant biomass degraders
- (2014) Sebastian GA Konietzny et al. Biotechnology for Biofuels
- Flavobacterium johnsoniae PorV Is Required for Secretion of a Subset of Proteins Targeted to the Type IX Secretion System
- (2014) Sampada S. Kharade et al. JOURNAL OF BACTERIOLOGY
- Analysis of the bovine rumen microbiome reveals a diversity of Sus-like polysaccharide utilization loci from the bacterial phylum Bacteroidetes
- (2014) Carly P. Rosewarne et al. JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY
- Accurate Proteome-wide Label-free Quantification by Delayed Normalization and Maximal Peptide Ratio Extraction, Termed MaxLFQ
- (2014) Jürgen Cox et al. MOLECULAR & CELLULAR PROTEOMICS
- Decision making inxia2
- (2013) Graeme Winter et al. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY
- The Genome of the Anaerobic Fungus Orpinomyces sp. Strain C1A Reveals the Unique Evolutionary History of a Remarkable Plant Biomass Degrader
- (2013) Noha H. Youssef et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Deletion of the Cytophaga hutchinsonii type IX secretion system gene sprP results in defects in gliding motility and cellulose utilization
- (2013) Yongtao Zhu et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- De novo prediction of the genomic components and capabilities for microbial plant biomass degradation from (meta-)genomes
- (2013) Aaron Weimann et al. Biotechnology for Biofuels
- Flavobacterium johnsoniae Chitinase ChiA Is Required for Chitin Utilization and Is Secreted by the Type IX Secretion System
- (2013) S. S. Kharade et al. JOURNAL OF BACTERIOLOGY
- IMG/M 4 version of the integrated metagenome comparative analysis system
- (2013) Victor M. Markowitz et al. NUCLEIC ACIDS RESEARCH
- Metagenomic Insights into the Carbohydrate-Active Enzymes Carried by the Microorganisms Adhering to Solid Digesta in the Rumen of Cows
- (2013) Lingling Wang et al. PLoS One
- Revealing Nature's Cellulase Diversity: The Digestion Mechanism of Caldicellulosiruptor bescii CelA
- (2013) R. Brunecky et al. SCIENCE
- Characterization of a family 5 glycoside hydrolase isolated from the outer membrane of cellulolytic Cytophaga hutchinsonii
- (2012) Yongtao Zhu et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- Novel enzymes for the degradation of cellulose
- (2012) Svein Horn et al. Biotechnology for Biofuels
- Evolution, substrate specificity and subfamily classification of glycoside hydrolase family 5 (GH5)
- (2012) Henrik Aspeborg et al. BMC EVOLUTIONARY BIOLOGY
- dbCAN: a web resource for automated carbohydrate-active enzyme annotation
- (2012) Yanbin Yin et al. NUCLEIC ACIDS RESEARCH
- iMOSFLM: a new graphical interface for diffraction-image processing withMOSFLM
- (2011) T. Geoff G. Battye et al. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY
- Overview of theCCP4 suite and current developments
- (2011) Martyn D. Winn et al. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY
- Dissecting structure–function–stability relationships of a thermostable GH5-CBM3 cellulase fromBacillus subtilis168
- (2011) Camila R. Santos et al. BIOCHEMICAL JOURNAL
- How recombinant swollenin from Kluyveromyces lactis affects cellulosic substrates and accelerates their hydrolysis
- (2011) Gernot Jäger et al. Biotechnology for Biofuels
- SignalP 4.0: discriminating signal peptides from transmembrane regions
- (2011) Thomas Nordahl Petersen et al. NATURE METHODS
- HMMER web server: interactive sequence similarity searching
- (2011) R. D. Finn et al. NUCLEIC ACIDS RESEARCH
- Reversed-phase chromatography with multiple fraction concatenation strategy for proteome profiling of human MCF10A cells
- (2011) Yuexi Wang et al. PROTEOMICS
- Isolation of Succinivibrionaceae Implicated in Low Methane Emissions from Tammar Wallabies
- (2011) P. B. Pope et al. SCIENCE
- Metagenomic Discovery of Biomass-Degrading Genes and Genomes from Cow Rumen
- (2011) M. Hess et al. SCIENCE
- Features and development ofCoot
- (2010) P. Emsley et al. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY
- PHENIX: a comprehensive Python-based system for macromolecular structure solution
- (2010) Paul D. Adams et al. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY
- Chemical profiles of switchgrass
- (2010) Zhoujian Hu et al. BIORESOURCE TECHNOLOGY
- Invited review: Ruminant ecology and evolution: Perspectives useful to ruminant livestock research and production
- (2010) T.J. Hackmann et al. JOURNAL OF DAIRY SCIENCE
- Adaptation to herbivory by the Tammar wallaby includes bacterial and glycoside hydrolase profiles different from other herbivores
- (2010) P. B. Pope et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- A protein secretion system linked to bacteroidete gliding motility and pathogenesis
- (2009) K. Sato et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- From cellulosomes to cellulosomics
- (2008) Edward A. Bayer et al. CHEMICAL RECORD
- Unique aspects of the grass cell wall
- (2008) J VOGEL CURRENT OPINION IN PLANT BIOLOGY
- MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification
- (2008) Jürgen Cox et al. NATURE BIOTECHNOLOGY
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationPublish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn More