A Novel Enzyme Portfolio for Red Algal Polysaccharide Degradation in the Marine Bacterium Paraglaciecola hydrolytica S66T Encoded in a Sizeable Polysaccharide Utilization Locus

Paraglaciecola hydrolytica sp. nov., a bacterium with hydrolytic activity against multiple seaweed-derived polysaccharides

(2017) Pernille Kjersgaard Bech et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Polysaccharide Utilization Loci: Fueling Microbial Communities

(2017) Julie M. Grondin et al.   JOURNAL OF BACTERIOLOGY

Carrageenan catabolism is encoded by a complex regulon in marine heterotrophic bacteria

(2017) Elizabeth Ficko-Blean et al.   Nature Communications

Functional characterization of a novel “ulvan utilization loci” found in Alteromonas sp. LOR genome

(2017) Elizabeth Foran et al.   Algal Research-Biomass Biofuels and Bioproducts

Gene Expression Analysis of Zobellia galactanivorans during the Degradation of Algal Polysaccharides Reveals both Substrate-Specific and Shared Transcriptome-Wide Responses

(2017) François Thomas et al.   Frontiers in Microbiology

Tight Coupling of Glaciecola spp. and Diatoms during Cold-Water Phytoplankton Spring Blooms

(2017) Markus von Scheibner et al.   Frontiers in Microbiology

Genome Sequencing Reveals the Complex Polysaccharide-Degrading Ability of Novel Deep-Sea Bacterium Flammeovirga pacifica WPAGA1

(2017) Boliang Gao et al.   Frontiers in Microbiology

Isolation and Complete Genome Sequence of Algibacter alginolytica sp. nov., a Novel Seaweed-Degrading Bacteroidetes Bacterium with Diverse Putative Polysaccharide Utilization Loci

(2016) Cong Sun et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Metabolic pathway of 3,6-anhydro-D-galactose in carrageenan-degrading microorganisms

(2016) Sun Bok Lee et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Habitat and taxon as driving forces of carbohydrate catabolism in marine heterotrophic bacteria: example of the model algae-associated bacterium Zobellia galactanivorans DsijT

(2016) Tristan Barbeyron et al.   ENVIRONMENTAL MICROBIOLOGY

Agarivorans aestuarii sp. nov., an agar-degrading bacterium isolated from a tidal flat

(2016) Song-Gun Kim et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Complete genome sequence and transcriptomic analysis of a novel marine strain Bacillus weihaiensis reveals the mechanism of brown algae degradation

(2016) Yueming Zhu et al.   Scientific Reports

Recurring patterns in bacterioplankton dynamics during coastal spring algae blooms

(2016) Hanno Teeling et al.   eLife

Matching the Diversity of Sulfated Biomolecules: Creation of a Classification Database for Sulfatases Reflecting Their Substrate Specificity

(2016) Tristan Barbeyron et al.   PLoS One

Bacterial community dynamics during polysaccharide degradation at contrasting sites in the Southern and Atlantic Oceans

(2015) Matthias Wietz et al.   ENVIRONMENTAL MICROBIOLOGY

Different utilization of alginate and other algal polysaccharides by marineAlteromonas macleodiiecotypes

(2015) Anna M. Neumann et al.   ENVIRONMENTAL MICROBIOLOGY

Oligosaccharides of κ/β-carrageenan from the red alga Tichocarpus crinitus and their ability to induce interleukin 10

(2015) Alexandra A. Kalitnik et al.   JOURNAL OF APPLIED PHYCOLOGY

Characterization of a novel alkaline arylsulfatase from Marinomonas sp. FW-1 and its application in the desulfation of red seaweed agar

(2015) Xueyan Wang et al.   JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY

Enzyme-Assisted Preparation of Furcellaran-Like κ-/β-Carrageenan

(2015) Aurélie Préchoux et al.   MARINE BIOTECHNOLOGY

The Pfam protein families database: towards a more sustainable future

(2015) Robert D. Finn et al.   NUCLEIC ACIDS RESEARCH

The Cultivable Surface Microbiota of the Brown Alga Ascophyllum nodosum is Enriched in Macroalgal-Polysaccharide-Degrading Bacteria

(2015) Marjolaine Martin et al.   Frontiers in Microbiology

A Novel Agarolytic β-Galactosidase Acts on Agarooligosaccharides for Complete Hydrolysis of Agarose into Monomers

(2014) Chan Hyoung Lee et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Microorganisms living on macroalgae: diversity, interactions, and biotechnological applications

(2014) Marjolaine Martin et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Metabolic pathway of 3,6-anhydro-L-galactose in agar-degrading microorganisms

(2014) Sun Bok Lee et al.   BIOTECHNOLOGY AND BIOPROCESS ENGINEERING

The novel catabolic pathway of 3,6-anhydro-L-galactose, the main component of red macroalgae, in a marine bacterium

(2014) Eun Ju Yun et al.   ENVIRONMENTAL MICROBIOLOGY

Niches of two polysaccharide-degrading Polaribacter isolates from the North Sea during a spring diatom bloom

(2014) Peng Xing et al.   ISME Journal

Functional characterization of polysaccharide utilization loci in the marine Bacteroidetes ‘Gramella forsetii’ KT0803

(2014) Antje Kabisch et al.   ISME Journal

How do gut microbes break down dietary fiber?

(2014) Nicolas Terrapon et al.   TRENDS IN BIOCHEMICAL SCIENCES

The Genome of the Alga-Associated Marine Flavobacterium Formosa agariphila KMM 3901TReveals a Broad Potential for Degradation of Algal Polysaccharides

(2013) Alexander J. Mann et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Structure-Function Analysis of a Broad SpecificityPopulus trichocarpaEndo-β-glucanase Reveals an Evolutionary Link between Bacterial Licheninases and PlantXTHGene Products

(2013) Jens M. Eklöf et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Isolation and Characterization of a Novel Agar-Degrading Marine Bacterium, Gayadomonas joobiniege gen, nov, sp. nov., from the Southern Sea, Korea

(2013) Won-Jae Chi   JOURNAL OF MICROBIOLOGY AND BIOTECHNOLOGY

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

The carbohydrate-active enzymes database (CAZy) in 2013

(2013) Vincent Lombard et al.   NUCLEIC ACIDS RESEARCH

Anti-tumor-Promoting Activities of Agaro-Oligosaccharides on Two-Stage Mouse Skin Carcinogenesis

(2012) Tatsuji Enoki et al.   BIOLOGICAL & PHARMACEUTICAL BULLETIN

Characterization of the first alginolytic operons in a marine bacterium: from their emergence in marine Flavobacteriia to their independent transfers to marine Proteobacteria and human gut Bacteroides

(2012) François Thomas et al.   ENVIRONMENTAL MICROBIOLOGY

Biochemical and Structural Characterization of the Complex Agarolytic Enzyme System from the Marine BacteriumZobellia galactanivorans

(2012) Jan-Hendrik Hehemann et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Controlling Carrageenan Structure Using a Novel Formylglycine-Dependent Sulfatase, an Endo-4S-iota-Carrageenan Sulfatase

(2012) Aurélie Préchoux et al.   MARINE BIOTECHNOLOGY

dbCAN: a web resource for automated carbohydrate-active enzyme annotation

(2012) Yanbin Yin et al.   NUCLEIC ACIDS RESEARCH

Substrate-Controlled Succession of Marine Bacterioplankton Populations Induced by a Phytoplankton Bloom

(2012) H. Teeling et al.   SCIENCE

Algal fucoidan: structural and size-dependent bioactivities and their perspectives

(2011) V. K. Morya et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Alginate Sequencing: An Analysis of Block Distribution in Alginates Using Specific Alginate Degrading Enzymes

(2011) Olav Andreas Aarstad et al.   BIOMACROMOLECULES

Comparison of the structures of hybrid κ-/β-carrageenans extracted from Furcellaria lumbricalis and Tichocarpus crinitus

(2011) Gaëlle Correc et al.   CARBOHYDRATE POLYMERS

Discovery and structural characterization of a novel glycosidase family of marine origin

(2011) Etienne Rebuffet et al.   ENVIRONMENTAL MICROBIOLOGY

Catenovulum agarivorans gen. nov., sp. nov., a peritrichously flagellated, chain-forming, agar-hydrolysing gammaproteobacterium from seawater

(2011) S. Yan et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

SignalP 4.0: discriminating signal peptides from transmembrane regions

(2011) Thomas Nordahl Petersen et al.   NATURE METHODS

Recognition and Degradation of Plant Cell Wall Polysaccharides by Two Human Gut Symbionts

(2011) Eric C. Martens et al.   PLOS BIOLOGY

Microbial Extracellular Enzymes and the Marine Carbon Cycle

(2010) Carol Arnosti   Annual Review of Marine Science

A mutant Pfu DNA polymerase designed for advanced uracil-excision DNA engineering

(2010) Morten HH Nørholm   BMC BIOTECHNOLOGY

Structural characterisation and bioactivities of hybrid carrageenan-like sulphated galactan from red alga Furcellaria lumbricalis

(2010) Bo Yang et al.   FOOD CHEMISTRY

Evaluation of reference genes for real-time quantitative PCR in the marine flavobacterium Zobellia galactanivorans

(2010) François Thomas et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Transfer of carbohydrate-active enzymes from marine bacteria to Japanese gut microbiota

(2010) Jan-Hendrik Hehemann et al.   NATURE

Carrageenans: Biological properties, chemical modifications and structural analysis – A review

(2009) Vanessa Leiria Campo et al.   CARBOHYDRATE POLYMERS

Complex Glycan Catabolism by the Human Gut Microbiota: The Bacteroidetes Sus-like Paradigm

(2009) Eric C. Martens et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

MicroScope: a platform for microbial genome annotation and comparative genomics

(2009) D. Vallenet et al.   Database-The Journal of Biological Databases and Curation

The RAST Server: Rapid Annotations using Subsystems Technology

(2008) Ramy K Aziz et al.   BMC GENOMICS