Gene duplicates cause hybrid lethality between sympatric species of Mimulus

Duplication and Loss of Function of Genes Encoding RNA Polymerase III Subunit C4 Causes Hybrid Incompatibility in Rice

(2017) Giao Ngoc Nguyen et al.   G3-Genes Genomes Genetics

Reproductive isolation and introgression between sympatricMimulusspecies

(2016) Amanda M. Kenney et al.   MOLECULAR ECOLOGY

Population structure and local selection yield high genomic variation inMimulus guttatus

(2016) Joshua R. Puzey et al.   MOLECULAR ECOLOGY

Plastid RNA polymerases: orchestration of enzymes with different evolutionary origins controls chloroplast biogenesis during the plant life cycle

(2015) Thomas Pfannschmidt et al.   JOURNAL OF EXPERIMENTAL BOTANY

Divergent sorting of a balanced ancestral polymorphism underlies the establishment of gene-flow barriers in Capsella

(2015) Adrien Sicard et al.   Nature Communications

Sex Ratio Meiotic Drive as a Plausible Evolutionary Mechanism for Hybrid Male Sterility

(2015) Linbin Zhang et al.   PLoS Genetics

Evidence of Natural Selection Acting on a Polymorphic Hybrid Incompatibility Locus in Mimulus

(2014) Andrea L. Sweigart et al.   GENETICS

Speciation and Introgression between Mimulus nasutus and Mimulus guttatus

(2014) Yaniv Brandvain et al.   PLoS Genetics

The Genomic Signal of Partial Sweeps in Mimulus guttatus

(2013) John K. Kelly et al.   Genome Biology and Evolution

The Standing Pool of Genomic Structural Variation in a Natural Population of Mimulus guttatus

(2013) Lex E. Flagel et al.   Genome Biology and Evolution

The genome portal of the Department of Energy Joint Genome Institute: 2014 updates

(2013) Henrik Nordberg et al.   NUCLEIC ACIDS RESEARCH

Fine-scale variation in meiotic recombination in Mimulus inferred from population shotgun sequencing

(2013) U. Hellsten et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Indirect Evolution of Hybrid Lethality Due to Linkage with Selected Locus in Mimulus guttatus

(2013) Kevin M. Wright et al.   PLOS BIOLOGY

TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions

(2013) Daehwan Kim et al.   GENOME BIOLOGY

Rapid Establishment of Genetic Incompatibility through Natural Epigenetic Variation

(2012) Stéphanie Durand et al.   CURRENT BIOLOGY

The Limits to Parapatric Speciation: Dobzhansky–Muller Incompatibilities in a Continent–Island Model

(2012) Claudia Bank et al.   GENETICS

Spatially and temporally varying selection on intrapopulation quantitative trait loci for a life history trade-off inMimulus guttatus

(2012) JULIUS P. MOJICA et al.   MOLECULAR ECOLOGY

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

(2012) Cole Trapnell et al.   Nature Protocols

The Genetics of Hybrid Incompatibilities

(2011) Shamoni Maheshwari et al.   Annual Review of Genetics

Characterization of the plastid-specific germination and seedling establishment transcriptional programme

(2011) E. Demarsy et al.   JOURNAL OF EXPERIMENTAL BOTANY

The Genome Portal of the Department of Energy Joint Genome Institute

(2011) I. V. Grigoriev et al.   NUCLEIC ACIDS RESEARCH

A Functional Component of the Transcriptionally Active Chromosome Complex, Arabidopsis pTAC14, Interacts with pTAC12/HEMERA and Regulates Plastid Gene Expression

(2011) Z.-P. Gao et al.   PLANT PHYSIOLOGY

Fast and accurate long-read alignment with Burrows–Wheeler transform

(2010) Heng Li et al.   BIOINFORMATICS

The molecular evolutionary basis of species formation

(2010) Daven C. Presgraves   NATURE REVIEWS GENETICS

Geographical variation in postzygotic isolation and its genetic basis within and between two Mimulus species

(2010) N. H. Martin et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Rice pollen hybrid incompatibility caused by reciprocal gene loss of duplicated genes

(2010) Y. Mizuta et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Mitochondrial gene in the nuclear genome induces reproductive barrier in rice

(2010) Y. Yamagata et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0

(2010) Stéphane Guindon et al.   SYSTEMATIC BIOLOGY

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Gene duplication and evolutionary novelty in plants

(2009) Lex E. Flagel et al.   NEW PHYTOLOGIST

Evolution of the Drosophila Nuclear Pore Complex Results in Multiple Hybrid Incompatibilities

(2009) S. Tang et al.   SCIENCE

Divergent Evolution of Duplicate Genes Leads to Genetic Incompatibilities Within A. thaliana

(2009) D. Bikard et al.   SCIENCE

Accelerated Evolution of the Prdm9 Speciation Gene across Diverse Metazoan Taxa

(2009) Peter L. Oliver et al.   PLoS Genetics

HYBRID MALE STERILITY IN MIMULUS (PHRYMACEAE) IS ASSOCIATED WITH A GEOGRAPHICALLY RESTRICTED MITOCHONDRIAL REARRANGEMENT

(2008) Andrea L. Case et al.   EVOLUTION

Recurrent Positive Selection of the Drosophila Hybrid Incompatibility Gene Hmr

(2008) S. Maheshwari et al.   MOLECULAR BIOLOGY AND EVOLUTION

A Single Gene Causes Both Male Sterility and Segregation Distortion in Drosophila Hybrids

(2008) N. Phadnis et al.   SCIENCE