Elucidation of the bacterial communities associated with the harmful microalgae Alexandrium tamarense and Cochlodinium polykrikoides using nanopore sequencing
出版年份 2018 全文链接
标题
Elucidation of the bacterial communities associated with the harmful microalgae Alexandrium tamarense and Cochlodinium polykrikoides using nanopore sequencing
作者
关键词
-
出版物
Scientific Reports
Volume 8, Issue 1, Pages -
出版商
Springer Nature
发表日期
2018-03-29
DOI
10.1038/s41598-018-23634-6
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- Identification of unique microbiomes associated with harmful algal blooms caused by Alexandrium fundyense and Dinophysis acuminata
- (2017) Theresa K. Hattenrath-Lehmann et al. HARMFUL ALGAE
- Profiling bacterial communities by MinION sequencing of ribosomal operons
- (2017) Lee J. Kerkhof et al. Microbiome
- Phylogenetic structure of bacterial assemblages co-occurring with Ostreopsis cf. ovata bloom
- (2016) Silvana Vanucci et al. HARMFUL ALGAE
- MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets
- (2016) Sudhir Kumar et al. MOLECULAR BIOLOGY AND EVOLUTION
- Sequencing 16S rRNA gene fragments using the PacBio SMRT DNA sequencing system
- (2016) Patrick D. Schloss et al. PeerJ
- Species-level resolution of 16S rRNA gene amplicons sequenced through the MinION™ portable nanopore sequencer
- (2016) Alfonso Benítez-Páez et al. GigaScience
- Dynamics of bacterial community structure during blooms of Cochlodinium polykrikoides (Gymnodiniales, Dinophyceae) in Korean coastal waters
- (2015) Bum Soo Park et al. HARMFUL ALGAE
- Interaction and signalling between a cosmopolitan phytoplankton and associated bacteria
- (2015) S. A. Amin et al. NATURE
- Genome sequence of the Roseovarius mucosus type strain (DSM 17069T), a bacteriochlorophyll a-containing representative of the marine Roseobacter group isolated from the dinoflagellate Alexandrium ostenfeldii
- (2015) Thomas Riedel et al. Standards in Genomic Sciences
- Particle-Associated Differ from Free-Living Bacteria in Surface Waters of the Baltic Sea
- (2015) Angelika Rieck et al. Frontiers in Microbiology
- Compact graphical representation of phylogenetic data and metadata with GraPhlAn
- (2015) Francesco Asnicar et al. PeerJ
- Poretools: a toolkit for analyzing nanopore sequence data
- (2014) N. J. Loman et al. BIOINFORMATICS
- Adaptation of an abundant Roseobacter RCA organism to pelagic systems revealed by genomic and transcriptomic analyses
- (2014) Sonja Voget et al. ISME Journal
- Temperature dependence of an estuarine harmful algal bloom: Resolving interannual variability in bloom dynamics using a degree-day approach
- (2014) David K. Ralston et al. LIMNOLOGY AND OCEANOGRAPHY
- Master recyclers: features and functions of bacteria associated with phytoplankton blooms
- (2014) Alison Buchan et al. NATURE REVIEWS MICROBIOLOGY
- Cryptic carbon and sulfur cycling between surface ocean plankton
- (2014) Bryndan P. Durham et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Oxidative mechanisms of fish hepatocyte toxicity by the harmful dinoflagellate Cochlodinium polykrikoides
- (2013) Jafar Shahraki et al. MARINE ENVIRONMENTAL RESEARCH
- Associating microbiome composition with environmental covariates using generalized UniFrac distances
- (2012) Jun Chen et al. BIOINFORMATICS
- Parameters for accurate genome alignment
- (2012) Martin C Frith et al. BMC BIOINFORMATICS
- Iron transport in the genus Marinobacter
- (2011) Shady A. Amin et al. BIOMETALS
- The MetJ regulon in gammaproteobacteria determined by comparative genomics methods
- (2011) Anne M Augustus et al. BMC GENOMICS
- EFFECT OF ELEVATED TEMPERATURE, DARKNESS, AND HYDROGEN PEROXIDE TREATMENT ON OXIDATIVE STRESS AND CELL DEATH IN THE BLOOM-FORMING TOXIC CYANOBACTERIUM MICROCYSTIS AERUGINOSA1
- (2011) Josée N. Bouchard et al. JOURNAL OF PHYCOLOGY
- Analysis of 16S rRNA Amplicon Sequencing Options on the Roche/454 Next-Generation Titanium Sequencing Platform
- (2011) Hideyuki Tamaki et al. PLoS One
- Analysis of sulfur-related transcription by Roseobacter communities using a taxon-specific functional gene microarray
- (2010) Johanna M. Rinta-Kanto et al. ENVIRONMENTAL MICROBIOLOGY
- Evaluation of different partial 16S rRNA gene sequence regions for phylogenetic analysis of microbiomes
- (2010) Minseok Kim et al. JOURNAL OF MICROBIOLOGICAL METHODS
- QIIME allows analysis of high-throughput community sequencing data
- (2010) J Gregory Caporaso et al. NATURE METHODS
- Most harmful algal bloom species are vitamin B1 and B12 auxotrophs
- (2010) Y. Z. Tang et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities
- (2009) P. D. Schloss et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Photolysis of iron-siderophore chelates promotes bacterial-algal mutualism
- (2009) S. A. Amin et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Harmful algal blooms and eutrophication: Examining linkages from selected coastal regions of the United States
- (2008) Donald M. Anderson et al. HARMFUL ALGAE
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