Surface ocean metabarcoding confirms limited diversity in planktonic foraminifera but reveals unknown hyper-abundant lineages
出版年份 2018 全文链接
标题
Surface ocean metabarcoding confirms limited diversity in planktonic foraminifera but reveals unknown hyper-abundant lineages
作者
关键词
-
出版物
Scientific Reports
Volume 8, Issue 1, Pages -
出版商
Springer Nature
发表日期
2018-02-01
DOI
10.1038/s41598-018-20833-z
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- (2017) Tristan Biard et al. ISME Journal
- Extreme Diversity of Diplonemid Eukaryotes in the Ocean
- (2016) Olga Flegontova et al. CURRENT BIOLOGY
- Protistan community analysis: key findings of a large-scale molecular sampling
- (2016) Lars Grossmann et al. ISME Journal
- Imagining Sisyphus happy: DNA barcoding and the unnamed majority
- (2016) Mark Blaxter PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Censusing marine eukaryotic diversity in the twenty-first century
- (2016) Matthieu Leray et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Nomenclature for the Nameless: A Proposal for an Integrative Molecular Taxonomy of Cryptic Diversity Exemplified by Planktonic Foraminifera
- (2016) Raphaël Morard et al. SYSTEMATIC BIOLOGY
- Benthic origin and earliest evolution of the first planktonic foraminifera after the Cretaceous/Palaeogene boundary mass extinction
- (2016) Ignacio Arenillas et al. HISTORICAL BIOLOGY
- Scraping the bottom of the barrel: are rare high throughput sequences artifacts?
- (2015) Shawn P. Brown et al. Fungal Ecology
- PFR2: a curated database of planktonic foraminifera 18S ribosomal DNA as a resource for studies of plankton ecology, biogeography and evolution
- (2015) Raphaël Morard et al. Molecular Ecology Resources
- Accurate multiplexing and filtering for high-throughput amplicon-sequencing
- (2015) Philippe Esling et al. NUCLEIC ACIDS RESEARCH
- Eukaryotic plankton diversity in the sunlit ocean
- (2015) C. de Vargas et al. SCIENCE
- Open science resources for the discovery and analysis of Tara Oceans data
- (2015) Stéphane Pesant et al. Scientific Data
- Metabarcoding Is Powerful yet Still Blind: A Comparative Analysis of Morphological and Molecular Surveys of Seagrass Communities
- (2015) Dominique A. Cowart et al. PLoS One
- Patterns of Rare and Abundant Marine Microbial Eukaryotes
- (2014) Ramiro Logares et al. CURRENT BIOLOGY
- Parsing ecological signal from noise in next generation amplicon sequencing
- (2014) Nhu H. Nguyen et al. NEW PHYTOLOGIST
- Intracellular Diversity of the V4 and V9 Regions of the 18S rRNA in Marine Protists (Radiolarians) Assessed by High-Throughput Sequencing
- (2014) Johan Decelle et al. PLoS One
- SSU rDNA Divergence in Planktonic Foraminifera: Molecular Taxonomy and Biogeographic Implications
- (2014) Aurore André et al. PLoS One
- Wide Occurrence of SSU rDNA Intragenomic Polymorphism in Foraminifera and its Implications for Molecular Species Identification
- (2014) Alexandra Anh-Thu Weber et al. PROTIST
- New supraordinal classification of Foraminifera: Molecules meet morphology
- (2013) Jan Pawlowski et al. MARINE MICROPALEONTOLOGY
- MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
- (2013) K. Katoh et al. MOLECULAR BIOLOGY AND EVOLUTION
- General Patterns of Diversity in Major Marine Microeukaryote Lineages
- (2013) Massimo C. Pernice et al. PLoS One
- Diversity patterns and activity of uncultured marine heterotrophic flagellates unveiled with pyrosequencing
- (2012) Ramiro Logares et al. ISME Journal
- Comparing the Hyper-Variable V4 and V9 Regions of the Small Subunit rDNA for Assessment of Ciliate Environmental Diversity
- (2012) Micah Dunthorn et al. JOURNAL OF EUKARYOTIC MICROBIOLOGY
- jModelTest 2: more models, new heuristics and parallel computing
- (2012) Diego Darriba et al. NATURE METHODS
- Sample richness and genetic diversity as drivers of chimera formation in nSSU metagenetic analyses
- (2012) V. G. Fonseca et al. NUCLEIC ACIDS RESEARCH
- The Protist Ribosomal Reference database (PR2): a catalog of unicellular eukaryote Small Sub-Unit rRNA sequences with curated taxonomy
- (2012) Laure Guillou et al. NUCLEIC ACIDS RESEARCH
- The SILVA ribosomal RNA gene database project: improved data processing and web-based tools
- (2012) Christian Quast et al. NUCLEIC ACIDS RESEARCH
- UCHIME improves sensitivity and speed of chimera detection
- (2011) Robert C. Edgar et al. BIOINFORMATICS
- ABGD, Automatic Barcode Gap Discovery for primary species delimitation
- (2011) N. PUILLANDRE et al. MOLECULAR ECOLOGY
- Interactive Tree Of Life v2: online annotation and display of phylogenetic trees made easy
- (2011) I. Letunic et al. NUCLEIC ACIDS RESEARCH
- Worldwide Genotyping in the Planktonic Foraminifer Globoconella inflata: Implications for Life History and Paleoceanography
- (2011) Raphaël Morard et al. PLoS One
- A Holistic Approach to Marine Eco-Systems Biology
- (2011) Eric Karsenti et al. PLOS BIOLOGY
- How Many Species Are There on Earth and in the Ocean?
- (2011) Camilo Mora et al. PLOS BIOLOGY
- A Clustering Optimization Strategy for Molecular Taxonomy Applied to Planktonic Foraminifera SSU rDNA
- (2010) Markus Göker et al. Evolutionary Bioinformatics
- TRADITIONAL AND EMERGING GEOCHEMICAL PROXIES IN FORAMINIFERA
- (2010) M. E. Katz et al. JOURNAL OF FORAMINIFERAL RESEARCH
- Insidious effects of sequencing errors on perceived diversity in molecular surveys
- (2010) Ian A. Dickie NEW PHYTOLOGIST
- New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0
- (2010) Stéphane Guindon et al. SYSTEMATIC BIOLOGY
- The genetic diversity of planktic foraminifera and the global distribution of ribosomal RNA genotypes
- (2008) Kate F. Darling et al. MARINE MICROPALEONTOLOGY
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