Prospects for harnessing biocide resistance for bioremediation and detoxification

Organohalide respiration in pristine environments: implications for the natural halogen cycle

(2017) Siavash Atashgahi et al.   ENVIRONMENTAL MICROBIOLOGY

Biocarriers Improve Bioaugmentation Efficiency of a Rapid Sand Filter for the Treatment of 2,6-Dichlorobenzamide-Contaminated Drinking Water

(2017) Benjamin Horemans et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Response and recovery of a pristine groundwater ecosystem impacted by toluene contamination – A meso-scale indoor aquifer experiment

(2017) Agnieszka Herzyk et al.   JOURNAL OF CONTAMINANT HYDROLOGY

Recovery of nearly 8,000 metagenome-assembled genomes substantially expands the tree of life

(2017) Donovan H. Parks et al.   Nature Microbiology

Laboratory and field scale bioremediation of hexachlorocyclohexane (HCH) contaminated soils by means of bioaugmentation and biostimulation

(2016) Nidhi Garg et al.   BIODEGRADATION

Geochemical and microbial community determinants of reductive dechlorination at a site biostimulated with glycerol

(2016) Siavash Atashgahi et al.   ENVIRONMENTAL MICROBIOLOGY

A bacterium that degrades and assimilates poly(ethylene terephthalate)

(2016) Shosuke Yoshida et al.   SCIENCE

Thousands of microbial genomes shed light on interconnected biogeochemical processes in an aquifer system

(2016) Karthik Anantharaman et al.   Nature Communications

Study of the Aminoglycoside Subsistence Phenotype of Bacteria Residing in the Gut of Humans and Zoo Animals

(2016) Teresita de J. Bello González et al.   Frontiers in Microbiology

The Genome of the Toluene-Degrading Pseudomonas veronii Strain 1YdBTEX2 and Its Differential Gene Expression in Contaminated Sand

(2016) Marian Morales et al.   PLoS One

New dioxygenase from metagenomic library from Brazilian soil: insights into antibiotic resistance and bioremediation

(2015) Débora Farage Knupp dos Santos et al.   BIOTECHNOLOGY LETTERS

Co-occurrence of resistance genes to antibiotics, biocides and metals reveals novel insights into their co-selection potential

(2015) Chandan Pal et al.   BMC GENOMICS

Degradation of trace concentrations of the persistent groundwater pollutant 2,6-dichlorobenzamide (BAM) in bioaugmented rapid sand filters

(2015) Christian Nyrop Albers et al.   WATER RESEARCH

Mining microbial metatranscriptomes for expression of antibiotic resistance genes under natural conditions

(2015) Dennis Versluis et al.   Scientific Reports

Role of primary substrate composition on microbial community structure and function and trace organic chemical attenuation in managed aquifer recharge systems

(2014) Dong Li et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Enhanced bioremediation of oil spills in the sea

(2014) Eliora Z Ron et al.   CURRENT OPINION IN BIOTECHNOLOGY

Desulfosporosinus acididurans sp. nov.: an acidophilic sulfate-reducing bacterium isolated from acidic sediments

(2014) Irene Sánchez-Andrea et al.   EXTREMOPHILES

Evidence of Geobacter-associated phage in a uranium-contaminated aquifer

(2014) Dawn E Holmes et al.   ISME Journal

Genome-wide analysis of Sphingomonas wittichii RW1 behaviour during inoculation and growth in contaminated sand

(2014) Silvia K Moreno-Forero et al.   ISME Journal

Sulfate reduction at low pH to remediate acid mine drainage

(2014) Irene Sánchez-Andrea et al.   JOURNAL OF HAZARDOUS MATERIALS

Adaptation of the Hydrocarbonoclastic Bacterium Alcanivorax borkumensis SK2 to Alkanes and Toxic Organic Compounds: a Physiological and Transcriptomic Approach

(2013) D. J. Naether et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Genome-wide transposon insertion scanning of environmental survival functions in the polycyclic aromatic hydrocarbon degrading bacteriumSphingomonas wittichii RW1

(2013) Clémence Roggo et al.   ENVIRONMENTAL MICROBIOLOGY

Microbial community adaptation to quaternary ammonium biocides as revealed by metagenomics

(2013) Seungdae Oh et al.   ENVIRONMENTAL MICROBIOLOGY

Reconstructing an ancestral genotype of two hexachlorocyclohexane-degrading Sphingobium species using metagenomic sequence data

(2013) Naseer Sangwan et al.   ISME Journal

Genome sequence and functional genomic analysis of the oil-degrading bacterium Oleispira antarctica

(2013) Michael Kube et al.   Nature Communications

Characterization of a MexAB-OprM efflux system necessary for productive metabolism of Pseudomonas azelaica HBP1 on 2-hydroxybiphenyl

(2013) K. Czechowska et al.   Frontiers in Microbiology

Membrane Vesicle Formation as a Multiple-Stress Response Mechanism Enhances Pseudomonas putida DOT-T1E Cell Surface Hydrophobicity and Biofilm Formation

(2012) Thomas Baumgarten et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Co-resistance: an opportunity for the bacteria and resistance genes

(2011) Rafael Cantón et al.   CURRENT OPINION IN PHARMACOLOGY

Microbial gene functions enriched in the Deepwater Horizon deep-sea oil plume

(2011) Zhenmei Lu et al.   ISME Journal

Selective removal of transition metals from acidic mine waters by novel consortia of acidophilic sulfidogenic bacteria

(2011) Ivan Ňancucheo et al.   Microbial Biotechnology

Thermodynamic limits to microbial life at high salt concentrations

(2010) Aharon Oren   ENVIRONMENTAL MICROBIOLOGY

Biochemistry of Microbial Degradation of Hexachlorocyclohexane and Prospects for Bioremediation

(2010) R. Lal et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Deep-Sea Oil Plume Enriches Indigenous Oil-Degrading Bacteria

(2010) Terry C. Hazen et al.   SCIENCE

Bioaugmentation as a strategy for cleaning up of soils contaminated with aromatic compounds

(2009) Agnieszka Mrozik et al.   MICROBIOLOGICAL RESEARCH

Membrane lipid homeostasis in bacteria

(2008) Yong-Mei Zhang et al.   NATURE REVIEWS MICROBIOLOGY