Transcriptomic response to GABA-producing Lactobacillus plantarum CGMCC 1.2437T induced by L-MSG

Catalytic Interactions and Molecular Docking of Bile Salt Hydrolase (BSH) from L. plantarum RYPR1 and Its Prebiotic Utilization

(2017) Ruby Yadav et al.   Frontiers in Microbiology

Probiotic Properties of Lactobacillus plantarum RYPR1 from an Indigenous Fermented Beverage Raabadi

(2016) Ruby Yadav et al.   Frontiers in Microbiology

An overview of advanced technologies for selection of probiotics and their expediency: A review

(2015) Ruby Yadav et al.   CRITICAL REVIEWS IN FOOD SCIENCE AND NUTRITION

Characterization of a glutamate decarboxylase (GAD) gene from Lactobacillus zymae

(2014) Ji Yeong Park et al.   BIOTECHNOLOGY LETTERS

Immunoregulatory effects on Caco-2 cells and mice of exopolysaccharides isolated from Lactobacillus acidophilus NCFM

(2014) Li Li et al.   Food & Function

Proteomic characterization of the acid tolerance response inLactobacillus delbrueckiisubsp.bulgaricus CAUH1 and functional identification of a novel acid stress-related transcriptional regulator Ldb0677

(2013) Zhengyuan Zhai et al.   ENVIRONMENTAL MICROBIOLOGY

Influence of preprocessing methods and fermentation of adzuki beans on γ-aminobutyric acid (GABA) accumulation by lactic acid bacteria

(2013) Wan-Chung Liao et al.   Journal of Functional Foods

Functional γ-Aminobutyrate Shunt in Listeria monocytogenes: Role in Acid Tolerance and Succinate Biosynthesis

(2012) Conor Feehily et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Comparative Analysis of Lactobacillus plantarum WCFS1 Transcriptomes by Using DNA Microarray and Next-Generation Sequencing Technologies

(2012) Milkha M. Leimena et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

A comprehensive evaluation of normalization methods for Illumina high-throughput RNA sequencing data analysis

(2012) M.-A. Dillies et al.   BRIEFINGS IN BIOINFORMATICS

Role of glutamate metabolism in bacterial responses towards acid and other stresses

(2012) C. Feehily et al.   JOURNAL OF APPLIED MICROBIOLOGY

Cloning, sequencing and expression of a glutamate decarboxylase gene from the GABA-producing strain Lactobacillus brevis CGMCC 1306

(2011) Enyu Fan et al.   ANNALS OF MICROBIOLOGY

Comprehensive Transcriptome Analysis of the Periodontopathogenic Bacterium Porphyromonas gingivalis W83

(2011) H. Hovik et al.   JOURNAL OF BACTERIOLOGY

Effect of acid stress on protein expression and phosphorylation in Lactobacillus rhamnosus GG

(2011) Johanna Koponen et al.   Journal of Proteomics

Enhancement of γ-Amminobutyric Acid Production by Lactobacillus sakei B2-16 Expressing Glutamate Decarboxylase from Lactobacillus plantarum ATCC 14917

(2011) Moo-Chang Kook   Journal of the Korean Society for Applied Biological Chemistry

Glutamate-induced metabolic changes in Lactococcus lactis NCDO 2118 during GABA production: combined transcriptomic and proteomic analysis

(2010) Roberto Mazzoli et al.   AMINO ACIDS

Lactic acid bacterial cell factories for gamma-aminobutyric acid

(2010) Haixing Li et al.   AMINO ACIDS

Deep sequencing-based transcriptome profiling analysis of bacteria-challenged Lateolabrax japonicus reveals insight into the immune-relevant genes in marine fish

(2010) Li-xin Xiang et al.   BMC GENOMICS

Physiological and Transcriptional Response of Lactobacillus casei ATCC 334 to Acid Stress

(2010) J. R. Broadbent et al.   JOURNAL OF BACTERIOLOGY

Gene ontology analysis for RNA-seq: accounting for selection bias

(2010) Matthew D Young et al.   GENOME BIOLOGY

Differential expression analysis for sequence count data

(2010) Simon Anders et al.   GENOME BIOLOGY

Medium optimization for production of gamma-aminobutyric acid by Lactobacillus brevis NCL912

(2009) Haixing Li et al.   AMINO ACIDS

Synthesis of γ-aminobutyric acid (GABA) by Lactobacillus plantarum DSM19463: functional grape must beverage and dermatological applications

(2009) Raffaella Di Cagno et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

TopHat: discovering splice junctions with RNA-Seq

(2009) Cole Trapnell et al.   BIOINFORMATICS

Next generation sequencing of microbial transcriptomes: challenges and opportunities

(2009) Arnoud H.M. van Vliet   FEMS MICROBIOLOGY LETTERS

Production of γ-aminobutyric acid in black raspberry juice during fermentation by Lactobacillus brevis GABA100

(2009) Ja Young Kim et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Biochemical characterization, mitochondrial localization, expression, and potential functions for an Arabidopsis γ-aminobutyrate transaminase that utilizes both pyruvate and glyoxylate

(2009) Shawn M. Clark et al.   JOURNAL OF EXPERIMENTAL BOTANY

The Sanger FASTQ file format for sequences with quality scores, and the Solexa/Illumina FASTQ variants

(2009) Peter J. A. Cock et al.   NUCLEIC ACIDS RESEARCH

Mapping the Burkholderia cenocepacia niche response via high-throughput sequencing

(2009) D. R. Yoder-Himes et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

First evidence of a membrane-bound, tyramine and β-phenylethylamine producing, tyrosine decarboxylase inEnterococcus faecalis: A two-dimensional electrophoresis proteomic study

(2009) Enrica Pessione et al.   PROTEOMICS

A Strand-Specific RNA–Seq Analysis of the Transcriptome of the Typhoid Bacillus Salmonella Typhi

(2009) Timothy T. Perkins et al.   PLoS Genetics

Improved high-performance liquid chromatographic method for GABA and glutamate determination in regions of the rodent brain

(2008) Danielle Marra de Freitas Silva et al.   JOURNAL OF NEUROSCIENCE METHODS

Mapping and quantifying mammalian transcriptomes by RNA-Seq

(2008) Ali Mortazavi et al.   NATURE METHODS

RNA-Seq: a revolutionary tool for transcriptomics

(2008) Zhong Wang et al.   NATURE REVIEWS GENETICS

Membrane lipid homeostasis in bacteria

(2008) Yong-Mei Zhang et al.   NATURE REVIEWS MICROBIOLOGY

Rerouting of pyruvate metabolism during acid adaptation in Lactobacillus bulgaricus

(2008) Annabelle Fernandez et al.   PROTEOMICS