UbiSite approach for comprehensive mapping of lysine and N-terminal ubiquitination sites
出版年份 2018 全文链接
标题
UbiSite approach for comprehensive mapping of lysine and N-terminal ubiquitination sites
作者
关键词
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出版物
NATURE STRUCTURAL & MOLECULAR BIOLOGY
Volume 25, Issue 7, Pages 631-640
出版商
Springer Nature
发表日期
2018-06-28
DOI
10.1038/s41594-018-0084-y
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注意：仅列出部分参考文献，下载原文获取全部文献信息。- Performance Evaluation of the Q Exactive HF-X for Shotgun Proteomics
- (2017) Christian D. Kelstrup et al. JOURNAL OF PROTEOME RESEARCH
- Quantitative Proteomics Reveals Extensive Changes in the Ubiquitinome after Perturbation of the Proteasome by Targeted dsRNA-Mediated Subunit Knockdown in Drosophila
- (2017) Karen A. Sap et al. JOURNAL OF PROTEOME RESEARCH
- StUbEx PLUS—A Modified Stable Tagged Ubiquitin Exchange System for Peptide Level Purification and In-Depth Mapping of Ubiquitination Sites
- (2017) Vyacheslav Akimov et al. JOURNAL OF PROTEOME RESEARCH
- Cylindromatosis Tumor Suppressor Protein (CYLD) Deubiquitinase is Necessary for Proper Ubiquitination and Degradation of the Epidermal Growth Factor Receptor
- (2017) Virginia Sanchez-Quiles et al. MOLECULAR & CELLULAR PROTEOMICS
- Internally tagged ubiquitin: a tool to identify linear polyubiquitin-modified proteins by mass spectrometry
- (2017) Katarzyna Kliza et al. NATURE METHODS
- Acute lymphoblastic leukemia cells are sensitive to disturbances in protein homeostasis induced by proteasome deubiquitinase inhibition
- (2017) Magdalena Mazurkiewicz et al. Oncotarget
- An Optimized Shotgun Strategy for the Rapid Generation of Comprehensive Human Proteomes
- (2017) Dorte B. Bekker-Jensen et al. Cell Systems
- The world of protein acetylation
- (2016) Adrian Drazic et al. BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS
- The Perseus computational platform for comprehensive analysis of (prote)omics data
- (2016) Stefka Tyanova et al. NATURE METHODS
- Drug developers delve into the cell's trash-disposal machinery
- (2016) Kelly Rae Chi NATURE REVIEWS DRUG DISCOVERY
- Regulation of DNA double-strand break repair by ubiquitin and ubiquitin-like modifiers
- (2016) Petra Schwertman et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- Multilayered proteomics reveals molecular switches dictating ligand-dependent EGFR trafficking
- (2016) Chiara Francavilla et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Multilayered proteomics reveals molecular switches dictating ligand-dependent EGFR trafficking
- (2016) Chiara Francavilla et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Highly Multiplexed Quantitative Mass Spectrometry Analysis of Ubiquitylomes
- (2016) Christopher M. Rose et al. Cell Systems
- Drug makers target ubiquitin proteasome pathway anew
- (2015) Cormac Sheridan NATURE BIOTECHNOLOGY
- Substrate degradation by the proteasome: A single-molecule kinetic analysis
- (2015) Y. Lu et al. SCIENCE
- Western Blotting Inaccuracies with Unverified Antibodies: Need for a Western Blotting Minimal Reporting Standard (WBMRS)
- (2015) Jennifer E. Gilda et al. PLoS One
- AMBRA1 Interplay with Cullin E3 Ubiquitin Ligases Regulates Autophagy Dynamics
- (2014) Manuela Antonioli et al. DEVELOPMENTAL CELL
- The role of the ubiquitin-proteasome pathway in cancer development and treatment
- (2014) Fangbao Ding Frontiers in Bioscience-Landmark
- Rapid and Deep Proteomes by Faster Sequencing on a Benchtop Quadrupole Ultra-High-Field Orbitrap Mass Spectrometer
- (2014) Christian D. Kelstrup et al. JOURNAL OF PROTEOME RESEARCH
- StUbEx: Stable Tagged Ubiquitin Exchange System for the Global Investigation of Cellular Ubiquitination
- (2014) Vyacheslav Akimov et al. JOURNAL OF PROTEOME RESEARCH
- Off-Line High-pH Reversed-Phase Fractionation for In-Depth Phosphoproteomics
- (2014) Tanveer S. Batth et al. JOURNAL OF PROTEOME RESEARCH
- Intrinsic disorder drives N-terminal ubiquitination by Ube2w
- (2014) Vinayak Vittal et al. Nature Chemical Biology
- PhosphoSitePlus, 2014: mutations, PTMs and recalibrations
- (2014) Peter V. Hornbeck et al. NUCLEIC ACIDS RESEARCH
- Phosphorylation Site Dynamics of Early T-cell Receptor Signaling
- (2014) Lily A. Chylek et al. PLoS One
- Ubiquitin pathways in neurodegenerative disease
- (2014) Graham Atkin et al. Frontiers in Molecular Neuroscience
- Induction of Tumor Cell Apoptosis by a Proteasome Deubiquitinase Inhibitor Is Associated with Oxidative Stress
- (2013) Slavica Brnjic et al. ANTIOXIDANTS & REDOX SIGNALING
- Advances in characterizing ubiquitylation sites by mass spectrometry
- (2013) Kathrine B Sylvestersen et al. CURRENT OPINION IN CHEMICAL BIOLOGY
- Status of Large-scale Analysis of Post-translational Modifications by Mass Spectrometry
- (2013) Jesper V. Olsen et al. MOLECULAR & CELLULAR PROTEOMICS
- Protein Group Modification and Synergy in the SUMO Pathway as Exemplified in DNA Repair
- (2012) Ivan Psakhye et al. CELL
- Using Guanidine-Hydrochloride for Fast and Efficient Protein Digestion and Single-step Affinity-purification Mass Spectrometry
- (2012) Jon W. Poulsen et al. JOURNAL OF PROTEOME RESEARCH
- Synaptic Protein Ubiquitination in Rat Brain Revealed by Antibody-based Ubiquitome Analysis
- (2012) Chan Hyun Na et al. JOURNAL OF PROTEOME RESEARCH
- Methods for Quantification ofin vivoChanges in Protein Ubiquitination following Proteasome and Deubiquitinase Inhibition
- (2012) Namrata D. Udeshi et al. MOLECULAR & CELLULAR PROTEOMICS
- Proteomic Analyses Reveal Divergent Ubiquitylation Site Patterns in Murine Tissues
- (2012) Sebastian A. Wagner et al. MOLECULAR & CELLULAR PROTEOMICS
- Refined Preparation and Use of Anti-diglycine Remnant (K-ε-GG) Antibody Enables Routine Quantification of 10,000s of Ubiquitination Sites in Single Proteomics Experiments
- (2012) Namrata D. Udeshi et al. MOLECULAR & CELLULAR PROTEOMICS
- Quantitative phosphoproteomics to characterize signaling networks
- (2012) Kristoffer T.G. Rigbolt et al. SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY
- Polyubiquitin Linkage Profiles in Three Models of Proteolytic Stress Suggest the Etiology of Alzheimer Disease
- (2011) Eric B. Dammer et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- GProX, a User-Friendly Platform for Bioinformatics Analysis and Visualization of Quantitative Proteomics Data
- (2011) Kristoffer T. G. Rigbolt et al. MOLECULAR & CELLULAR PROTEOMICS
- A Proteome-wide, Quantitative Survey of In Vivo Ubiquitylation Sites Reveals Widespread Regulatory Roles
- (2011) Sebastian A. Wagner et al. MOLECULAR & CELLULAR PROTEOMICS
- Characterization of ubiquitination dependent dynamics in growth factor receptor signaling by quantitative proteomics
- (2011) Vyacheslav Akimov et al. Molecular BioSystems
- Systematic and Quantitative Assessment of the Ubiquitin-Modified Proteome
- (2011) Woong Kim et al. MOLECULAR CELL
- SHARPIN forms a linear ubiquitin ligase complex regulating NF-κB activity and apoptosis
- (2011) Fumiyo Ikeda et al. NATURE
- Global quantification of mammalian gene expression control
- (2011) Björn Schwanhäusser et al. NATURE
- Inhibition of proteasome deubiquitinating activity as a new cancer therapy
- (2011) Pádraig D'Arcy et al. NATURE MEDICINE
- MINT, the molecular interaction database: 2012 update
- (2011) Luana Licata et al. NUCLEIC ACIDS RESEARCH
- Mass Spectrometric Analysis of Lysine Ubiquitylation Reveals Promiscuity at Site Level
- (2010) Jannie M. R. Danielsen et al. MOLECULAR & CELLULAR PROTEOMICS
- Global analysis of lysine ubiquitination by ubiquitin remnant immunoaffinity profiling
- (2010) Guoqiang Xu et al. NATURE BIOTECHNOLOGY
- Quantitative Proteomics Reveals the Function of Unconventional Ubiquitin Chains in Proteasomal Degradation
- (2009) Ping Xu et al. CELL
- Efficient protection and isolation of ubiquitylated proteins using tandem ubiquitin-binding entities
- (2009) Roland Hjerpe et al. EMBO REPORTS
- Improved visualization of protein consensus sequences by iceLogo
- (2009) Niklaas Colaert et al. NATURE METHODS
- Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
- (2009) Da Wei Huang et al. Nature Protocols
- Ubiquitin-binding domains — from structures to functions
- (2009) Ivan Dikic et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- Inactivation of Effector Caspases through Nondegradative Polyubiquitylation
- (2008) Mark Ditzel et al. MOLECULAR CELL
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