Impact of soil pedogenesis on the diversity and composition of fungal communities across the California soil chronosequence of Mendocino

Ancestral alliances: Plant mutualistic symbioses with fungi and bacteria

(2017) Francis M. Martin et al.   SCIENCE

Responses of communities of soil organisms and plants to soil aging at two contrasting long-term chronosequences

(2017) Stef Bokhorst et al.   SOIL BIOLOGY & BIOCHEMISTRY

Soil networks become more connected and take up more carbon as nature restoration progresses

(2017) Elly Morriën et al.   Nature Communications

Isolating a functionally relevant guild of fungi from the root microbiome of Populus

(2016) Gregory Bonito et al.   Fungal Ecology

FUNGuild: An open annotation tool for parsing fungal community datasets by ecological guild

(2016) Nhu H. Nguyen et al.   Fungal Ecology

Into the functional ecology of ectomycorrhizal communities: environmental filtering of enzymatic activities

(2016) Courty Pierre-Emmanuel et al.   JOURNAL OF ECOLOGY

Changes in ectomycorrhizal fungal community composition and declining diversity along a 2-million-year soil chronosequence

(2016) Felipe E. Albornoz et al.   MOLECULAR ECOLOGY

Ecology of the forest microbiome: Highlights of temperate and boreal ecosystems

(2016) S. Uroz et al.   SOIL BIOLOGY & BIOCHEMISTRY

Ectomycorrhizal ecology is imprinted in the genome of the dominant symbiotic fungus Cenococcum geophilum

(2016) Martina Peter et al.   Nature Communications

Specific impacts of beech and Norway spruce on the structure and diversity of the rhizosphere and soil microbial communities

(2016) S. Uroz et al.   Scientific Reports

Compartmentalized and contrasted response of ectomycorrhizal and soil fungal communities of Scots pine forests along elevation gradients in France and Spain

(2015) Ana Rincón et al.   ENVIRONMENTAL MICROBIOLOGY

Soil Parameters Drive the Structure, Diversity and Metabolic Potentials of the Bacterial Communities Across Temperate Beech Forest Soil Sequences

(2015) M. Jeanbille et al.   MICROBIAL ECOLOGY

Changes in fungal communities along a boreal forest soil fertility gradient

(2015) Erica Sterkenburg et al.   NEW PHYTOLOGIST

Ectomycorrhizal fungi decompose soil organic matter using oxidative mechanisms adapted from saprotrophic ancestors

(2015) Firoz Shah et al.   NEW PHYTOLOGIST

Revisiting the ‘Gadgil effect’: do interguild fungal interactions control carbon cycling in forest soils?

(2015) Christopher W. Fernandez et al.   NEW PHYTOLOGIST

limma powers differential expression analyses for RNA-sequencing and microarray studies

(2015) Matthew E. Ritchie et al.   NUCLEIC ACIDS RESEARCH

Plant host and soil origin influence fungal and bacterial assemblages in the roots of woody plants

(2014) Gregory Bonito et al.   MOLECULAR ECOLOGY

Host identity is a dominant driver of mycorrhizal fungal community composition during ecosystem development

(2014) Laura B. Martínez-García et al.   NEW PHYTOLOGIST

Ectomycorrhizal fungi - potential organic matter decomposers, yet not saprotrophs

(2014) Björn D. Lindahl et al.   NEW PHYTOLOGIST

Carbon sequestration is related to mycorrhizal fungal community shifts during long-term succession in boreal forests

(2014) Karina E. Clemmensen et al.   NEW PHYTOLOGIST

Global diversity and geography of soil fungi

(2014) L. Tedersoo et al.   SCIENCE

Ectomycorrhizal fungal traits reflect environmental conditions along a coastal California edaphic gradient

(2013) Holly V. Moeller et al.   FEMS MICROBIOLOGY ECOLOGY

Below-ground fine-scale distribution and soil versus fine root detection of fungal and soil oomycete communities in a French beech forest

(2013) Aurore Coince et al.   Fungal Ecology

Ectomycorrhizal fungi contribute to soil organic matter cycling in sub-boreal forests

(2013) Lori A Phillips et al.   ISME Journal

Soil bacterial community succession during long-term ecosystem development

(2013) Kamlesh Jangid et al.   MOLECULAR ECOLOGY

Towards a unified paradigm for sequence-based identification of fungi

(2013) Urmas Kõljalg et al.   MOLECULAR ECOLOGY

UPARSE: highly accurate OTU sequences from microbial amplicon reads

(2013) Robert C Edgar   NATURE METHODS

Mycorrhizas and mycorrhizal fungal communities throughout ecosystem development

(2013) Ian A. Dickie et al.   PLANT AND SOIL

Evidence for progressive phosphorus limitation over long-term ecosystem development: Examination of a biogeochemical paradigm

(2013) Jorge E. Izquierdo et al.   PLANT AND SOIL

Structure and function of bacterial communities in ageing soils: Insights from the Mendocino ecological staircase

(2013) S. Uroz et al.   SOIL BIOLOGY & BIOCHEMISTRY

Spatially variable natural selection and the divergence between parapatric subspecies of lodgepole pine (Pinus contorta , Pinaceae)

(2012) Andrew J. Eckert et al.   AMERICAN JOURNAL OF BOTANY

Intraspecific ITS Variability in the Kingdom Fungi as Expressed in the International Sequence Databases and Its Implications for Molecular Species Identification

(2012) R. Henrik Nilsson et al.   Evolutionary Bioinformatics

Fungal community dynamics in relation to substrate quality of decaying Norway spruce (Picea abies [L.] Karst.) logs in boreal forests

(2012) Tiina Rajala et al.   FEMS MICROBIOLOGY ECOLOGY

Soil and plant factors driving the community of soil-borne microorganisms across chronosequences of secondary succession of chalk grasslands with a neutral pH

(2011) Eiko Kuramae et al.   FEMS MICROBIOLOGY ECOLOGY

Changes in the root-associated fungal communities along a primary succession gradient analysed by 454 pyrosequencing

(2011) RAKEL BLAALID et al.   MOLECULAR ECOLOGY

Influence of Forest Trees on the Distribution of Mineral Weathering-Associated Bacterial Communities of the Scleroderma citrinum Mycorrhizosphere

(2010) C. Calvaruso et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Understanding ecosystem retrogression

(2010) Duane A. Peltzer et al.   ECOLOGICAL MONOGRAPHS

Soil bacterial and fungal communities across a pH gradient in an arable soil

(2010) Johannes Rousk et al.   ISME Journal

Distribution of High Bacterial Taxa Across the Chronosequence of Two Alpine Glacier Forelands

(2010) Laurent Philippot et al.   MICROBIAL ECOLOGY

The role of ectomycorrhizal communities in forest ecosystem processes: New perspectives and emerging concepts

(2010) Pierre-Emmanuel Courty et al.   SOIL BIOLOGY & BIOCHEMISTRY

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Pyrosequencing-Based Assessment of Soil pH as a Predictor of Soil Bacterial Community Structure at the Continental Scale

(2009) C. L. Lauber et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Ectomycorrhizal fungal communities associated with Pinus thunbergii in the eastern coastal pine forests of Korea

(2009) Keisuke Obase et al.   MYCORRHIZA

454 Pyrosequencing analyses of forest soils reveal an unexpectedly high fungal diversity

(2009) M. Buée et al.   NEW PHYTOLOGIST

Shifting microbial community structure across a marine terrace grassland chronosequence, Santa Cruz, California

(2009) Joel Moore et al.   SOIL BIOLOGY & BIOCHEMISTRY

Mineral weathering by bacteria: ecology, actors and mechanisms

(2009) Stéphane Uroz et al.   TRENDS IN MICROBIOLOGY

The influence of soil properties on the structure of bacterial and fungal communities across land-use types

(2008) Christian L. Lauber et al.   SOIL BIOLOGY & BIOCHEMISTRY

Plant nutrient-acquisition strategies change with soil age

(2008) H LAMBERS et al.   TRENDS IN ECOLOGY & EVOLUTION

Chemical weathering of a marine terrace chronosequence, Santa Cruz, California I: Interpreting rates and controls based on soil concentration–depth profiles

(2007) Art F. White et al.   GEOCHIMICA ET COSMOCHIMICA ACTA