The evolutionary origins of cell type diversification and the role of intrinsically disordered proteins

The origins of developmental gene regulation

(2017) César Arenas-Mena   EVOLUTION & DEVELOPMENT

Evidence for a Strong Correlation Between Transcription Factor Protein Disorder and Organismic Complexity

(2017) Inmaculada Yruela et al.   Genome Biology and Evolution

Simultaneous quantification of protein order and disorder

(2017) Pietro Sormanni et al.   Nature Chemical Biology

Evolutionary forces affecting synonymous variations in plant genomes

(2017) Yves Clément et al.   PLoS Genetics

Absence of residual structure in the intrinsically disordered regulatory protein CP12 in its reduced state

(2016) Hélène Launay et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Group 3 LEA protein model peptides protect enzymes against desiccation stress

(2016) Takao Furuki et al.   BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS

The new (dis)order in RNA regulation

(2016) Aino I. Järvelin et al.   Cell Communication and Signaling

The intriguing CP12-like tail of adenylate kinase 3 fromChlamydomonas reinhardtii

(2016) Gabriel Thieulin-Pardo et al.   FEBS Journal

Modulation of Intrinsically Disordered Protein Function by Post-translational Modifications

(2016) Alaji Bah et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Comprehensive Identification of RNA-Binding Domains in Human Cells

(2016) Alfredo Castello et al.   MOLECULAR CELL

Structural disorder of monomeric α-synuclein persists in mammalian cells

(2016) Francois-Xavier Theillet et al.   NATURE

The origin and evolution of cell types

(2016) Detlev Arendt et al.   NATURE REVIEWS GENETICS

Plant development regulation: Overview and perspectives

(2015) Inmaculada Yruela   JOURNAL OF PLANT PHYSIOLOGY

Emerging Roles of Disordered Sequences in RNA-Binding Proteins

(2015) Sara Calabretta et al.   TRENDS IN BIOCHEMICAL SCIENCES

GC-Content Evolution in Bacterial Genomes: The Biased Gene Conversion Hypothesis Expands

(2015) Florent Lassalle et al.   PLoS Genetics

Intrinsically Disordered Proteins and Intrinsically Disordered Protein Regions

(2014) Christopher J. Oldfield et al.   Annual Review of Biochemistry

Dynamics of the active site architecture in plant-type ferredoxin-NADP+ reductases catalytic complexes

(2014) Ana Sánchez-Azqueta et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Looping Back to Leap Forward: Transcription Enters a New Era

(2014) Michael Levine et al.   CELL

Physicochemical Properties of Cells and Their Effects on Intrinsically Disordered Proteins (IDPs)

(2014) Francois-Xavier Theillet et al.   CHEMICAL REVIEWS

Perspectives on the evolution, assembly and conformational dynamics of fatty acid synthase type I (FAS I) systems

(2014) Martin Grininger   CURRENT OPINION IN STRUCTURAL BIOLOGY

Bioattractors: dynamical systems theory and the evolution of regulatory processes

(2014) Johannes Jaeger et al.   JOURNAL OF PHYSIOLOGY-LONDON

Glyceraldehyde-3-phosphate dehydrogenase is regulated by ferredoxin-NADP reductase in the diatomAsterionella formosa

(2014) Malika Mekhalfi et al.   NEW PHYTOLOGIST

The Ubiquitous Distribution of Late Embryogenesis Abundant Proteins across Cell Compartments inArabidopsisOffers Tailored Protection against Abiotic Stress

(2014) Adrien Candat et al.   PLANT CELL

RcLEA, a late embryogenesis abundant protein gene isolated from Rosa chinensis, confers tolerance to Escherichia coli and Arabidopsis thaliana and stabilizes enzyme activity under diverse stresses

(2014) Xuan Zhang et al.   PLANT MOLECULAR BIOLOGY

The structural and functional signatures of proteins that undergo multiple events of post-translational modification

(2014) Vikas Pejaver et al.   PROTEIN SCIENCE

Evolutionary Origins of the Multienzyme Architecture of Giant Fungal Fatty Acid Synthase

(2014) Habib S.T. Bukhari et al.   STRUCTURE

The evolutionary-developmental origins of multicellularity

(2013) K. J. Niklas   AMERICAN JOURNAL OF BOTANY

Genetic recombination is associated with intrinsic disorder in plant proteomes

(2013) Inmaculada Yruela et al.   BMC GENOMICS

Regulation of splicing by SR proteins and SR protein-specific kinases

(2013) Zhihong Zhou et al.   CHROMOSOMA

Alternative splicing of intrinsically disordered regions and rewiring of protein interactions

(2013) Marija Buljan et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

The Prokaryotic FAD Synthetase Family: A Potential Drug Target

(2013) Ana Serrano et al.   CURRENT PHARMACEUTICAL DESIGN

The origins of multicellular organisms

(2013) Karl J. Niklas et al.   EVOLUTION & DEVELOPMENT

Dynamics of the intrinsically disordered protein CP12 in its association with GAPDH in the green alga Chlamydomonas reinhardtii: a fuzzy complex

(2013) Elisabetta Mileo et al.   Molecular BioSystems

Structure and Conformational Variability of the Mycobacterium tuberculosis Fatty Acid Synthase Multienzyme Complex

(2013) Luciano Ciccarelli et al.   STRUCTURE

Comprehensive Comparative Assessment of In-Silico Predictors of Disordered Regions

(2012) Zhen-Ling Peng et al.   CURRENT PROTEIN & PEPTIDE SCIENCE

Orderly order in protein intrinsic disorder distribution: disorder in 3500 proteomes from viruses and the three domains of life

(2012) Bin Xue et al.   JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS

An assignment of intrinsically disordered regions of proteins based on NMR structures

(2012) Motonori Ota et al.   JOURNAL OF STRUCTURAL BIOLOGY

D2P2: database of disordered protein predictions

(2012) Matt E. Oates et al.   NUCLEIC ACIDS RESEARCH

Structural Disorder in Eukaryotes

(2012) Rita Pancsa et al.   PLoS One

Bioinformatics analysis of disordered proteins in prokaryotes

(2011) Gordana M Pavlović-Lažetić et al.   BMC BIOINFORMATICS

Evolutionary divergence of chloroplast FAD synthetase proteins

(2010) Inmaculada Yruela et al.   BMC EVOLUTIONARY BIOLOGY

Contrasting GC-content dynamics across 33 mammalian genomes: Relationship with life-history traits and chromosome sizes

(2010) J. Romiguier et al.   GENOME RESEARCH

Musite, a Tool for Global Prediction of General and Kinase-specific Phosphorylation Sites

(2010) Jianjiong Gao et al.   MOLECULAR & CELLULAR PROTEOMICS

What is an Individual Organism? A Multilevel Selection Perspective

(2010) Henri J. Folse et al.   QUARTERLY REVIEW OF BIOLOGY

Close encounters of the third kind: disordered domains and the interactions of proteins

(2009) Peter Tompa et al.   BIOESSAYS

Predicting intrinsic disorder in proteins: an overview

(2009) Bo He et al.   CELL RESEARCH

CP12 fromChlamydomonas reinhardtii, a Permanent Specific “Chaperone-like” Protein of Glyceraldehyde-3-phosphate Dehydrogenase

(2009) Jenny Erales et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Structure and Mechanism of a Eukaryotic FMN Adenylyltransferase

(2009) Carlos Huerta et al.   JOURNAL OF MOLECULAR BIOLOGY

The evolution of hierarchical gene regulatory networks

(2009) Douglas H. Erwin et al.   NATURE REVIEWS GENETICS

Intrinsic Structural Disorder Confers Cellular Viability on Oncogenic Fusion Proteins

(2009) Hedi Hegyi et al.   PLoS Computational Biology

Flexible nets: disorder and induced fit in the associations of p53 and 14-3-3 with their partners

(2008) Christopher J Oldfield et al.   BMC GENOMICS

Evo-Devo and an Expanding Evolutionary Synthesis: A Genetic Theory of Morphological Evolution

(2008) Sean B. Carroll   CELL

Function and structure of inherently disordered proteins

(2008) A Keith Dunker et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

Fuzzy complexes: polymorphism and structural disorder in protein–protein interactions

(2007) Peter Tompa et al.   TRENDS IN BIOCHEMICAL SCIENCES