Optimized perfusion-based CUBIC protocol for the efficient whole-body clearing and imaging of rat organs

Quantifying three-dimensional rodent retina vascular development using optical tissue clearing and light-sheet microscopy

(2017) Jasmine N. Singh et al.   JOURNAL OF BIOMEDICAL OPTICS

Water Treatment by Magnetic Field Increases Bone Mineral Density of Rats

(2017) Geraldo Balieiro Neto et al.   JOURNAL OF CLINICAL DENSITOMETRY

Automatic and adaptive heterogeneous refractive index compensation for light-sheet microscopy

(2017) Duncan P. Ryan et al.   Nature Communications

Whole-Body Profiling of Cancer Metastasis with Single-Cell Resolution

(2017) Shimpei I. Kubota et al.   Cell Reports

Neuroscience in the third dimension: shedding new light on the brain with tissue clearing

(2017) Robin J. Vigouroux et al.   Molecular Brain

Chemical Principles in Tissue Clearing and Staining Protocols for Whole-Body Cell Profiling

(2016) Kazuki Tainaka et al.   Annual Review of Cell and Developmental Biology

Revisiting in vivo staining with alizarin red S - a valuable approach to analyse zebrafish skeletal mineralization during development and regeneration

(2016) A. Bensimon-Brito et al.   BMC DEVELOPMENTAL BIOLOGY

Wiring and Molecular Features of Prefrontal Ensembles Representing Distinct Experiences

(2016) Li Ye et al.   CELL

Mapping of Brain Activity by Automated Volume Analysis of Immediate Early Genes

(2016) Nicolas Renier et al.   CELL

Light sheet fluorescence microscopy for in situ cell interaction analysis in mouse lymph nodes

(2016) Jun Abe et al.   JOURNAL OF IMMUNOLOGICAL METHODS

Fully Automated Evaluation of Total Glomerular Number and Capillary Tuft Size in Nephritic Kidneys Using Lightsheet Microscopy

(2016) Anika Klingberg et al.   JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY

Multiplexed and scalable super-resolution imaging of three-dimensional protein localization in size-adjustable tissues

(2016) Taeyun Ku et al.   NATURE BIOTECHNOLOGY

Shrinkage-mediated imaging of entire organs and organisms using uDISCO

(2016) Chenchen Pan et al.   NATURE METHODS

Super-Resolution Mapping of Neuronal Circuitry With an Index-Optimized Clearing Agent

(2016) Meng-Tsen Ke et al.   Cell Reports

Light-sheet microscopy imaging of a whole cleared rat brain with Thy1-GFP transgene

(2016) Marzena Stefaniuk et al.   Scientific Reports

Rats demonstrate helping behavior toward a soaked conspecific

(2015) Nobuya Sato et al.   ANIMAL COGNITION

Simplified CLARITY for visualizing immunofluorescence labeling in the developing rat brain

(2015) Huiyuan Zheng et al.   Brain Structure & Function

Simple, Scalable Proteomic Imaging for High-Dimensional Profiling of Intact Systems

(2015) Evan Murray et al.   CELL

Advanced CUBIC protocols for whole-brain and whole-body clearing and imaging

(2015) Etsuo A Susaki et al.   Nature Protocols

Visualizing Whole-Brain Activity and Development at the Single-Cell Level Using Light-Sheet Microscopy

(2015) Philipp J. Keller et al.   NEURON

A comparative study on toxicity induced by carbosulfan and malathion in Wistar rat liver and spleen

(2015) Ines El-Bini Dhouib et al.   PESTICIDE BIOCHEMISTRY AND PHYSIOLOGY

A versatile clearing agent for multi-modal brain imaging

(2015) Irene Costantini et al.   Scientific Reports

Whole-Brain Imaging with Single-Cell Resolution Using Chemical Cocktails and Computational Analysis

(2014) Etsuo A. Susaki et al.   CELL

Single-Cell Phenotyping within Transparent Intact Tissue through Whole-Body Clearing

(2014) Bin Yang et al.   CELL

Whole-Body Imaging with Single-Cell Resolution by Tissue Decolorization

(2014) Kazuki Tainaka et al.   CELL

YIA1 Early Detection of the Process of Vascular Calcification with Spect-ct and Pet-ct using Novel Bone Seeking Radiopharmaceuticals in Rat Models

(2014) Catherine Shanahan et al.   HEART

Simplified method to perform CLARITY imaging

(2014) Ekaterina Poguzhelskaya et al.   Molecular Neurodegeneration

Generation of muscular dystrophy model rats with a CRISPR/Cas system

(2014) Katsuyuki Nakamura et al.   Scientific Reports

CLARITY for mapping the nervous system

(2013) Kwanghun Chung et al.   NATURE METHODS

SeeDB: a simple and morphology-preserving optical clearing agent for neuronal circuit reconstruction

(2013) Meng-Tsen Ke et al.   NATURE NEUROSCIENCE

Fiji: an open-source platform for biological-image analysis

(2012) Johannes Schindelin et al.   NATURE METHODS

Three-dimensional imaging of solvent-cleared organs using 3DISCO

(2012) Ali Ertürk et al.   Nature Protocols

Scale: a chemical approach for fluorescence imaging and reconstruction of transparent mouse brain

(2011) Hiroshi Hama et al.   NATURE NEUROSCIENCE

Empathy and Pro-Social Behavior in Rats

(2011) I. B.-A. Bartal et al.   SCIENCE

Rats!

(2009) P. M. Iannaccone et al.   Disease Models & Mechanisms