Life on N2O: deciphering the ecophysiology of N2O respiring bacterial communities in a continuous culture

Genomics and Ecology of Novel N 2 O-Reducing Microorganisms

(2018) Sara Hallin et al.   TRENDS IN MICROBIOLOGY

Spatial and phyloecological analyses of nosZ genes underscore niche differentiation amongst terrestrial N 2 O reducing communities

(2017) Jaanis Juhanson et al.   SOIL BIOLOGY & BIOCHEMISTRY

Nitrous Oxide Reduction Kinetics Distinguish Bacteria Harboring Clade I NosZ from Those Harboring Clade II NosZ

(2016) Sukhwan Yoon et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Transcriptional and metabolic regulation of denitrification in P aracoccus denitrificans allows low but significant activity of nitrous oxide reductase under oxic conditions

(2016) Zhi Qu et al.   ENVIRONMENTAL MICROBIOLOGY

Non-denitrifying nitrous oxide-reducing bacteria - An effective N 2 O sink in soil

(2016) L.A. Domeignoz-Horta et al.   SOIL BIOLOGY & BIOCHEMISTRY

Soil type overrides plant effect on genetic and enzymatic N 2 O production potential in arable soils

(2016) Daniel R.H. Graf et al.   SOIL BIOLOGY & BIOCHEMISTRY

Habitat partitioning of marine benthic denitrifier communities in response to oxygen availability

(2016) Lea Wittorf et al.   Environmental Microbiology Reports

VSEARCH: a versatile open source tool for metagenomics

(2016) Torbjørn Rognes et al.   PeerJ

Three transcription regulators of the Nss family mediate the adaptive response induced by nitrate, nitric oxide or nitrous oxide in W olinella succinogenes

(2015) Melanie Kern et al.   ENVIRONMENTAL MICROBIOLOGY

Genomic resolution of linkages in carbon, nitrogen, and sulfur cycling among widespread estuary sediment bacteria

(2015) Brett J Baker et al.   Microbiome

Pathway of nitrous oxide consumption in isolatedPseudomonas stutzeristrains under anoxic and oxic conditions

(2014) Joachim Desloover et al.   ENVIRONMENTAL MICROBIOLOGY

Development of a Prokaryotic Universal Primer for Simultaneous Analysis of Bacteria and Archaea Using Next-Generation Sequencing

(2014) Shunsuke Takahashi et al.   PLoS One

Intergenomic Comparisons Highlight Modularity of the Denitrification Pathway and Underpin the Importance of Community Structure for N2O Emissions

(2014) Daniel R. H. Graf et al.   PLoS One

Recently identified microbial guild mediates soil N2O sink capacity

(2014) Christopher M. Jones et al.   Nature Climate Change

PEAR: a fast and accurate Illumina Paired-End reAd mergeR

(2013) J. Zhang et al.   BIOINFORMATICS

Insights into the phylogeny and coding potential of microbial dark matter

(2013) Christian Rinke et al.   NATURE

Copper control of bacterial nitrous oxide emission and its impact on vitamin B12-dependent metabolism

(2013) M. J. Sullivan et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

FunGene: the functional gene pipeline and repository

(2013) Jordan A. Fish et al.   Frontiers in Microbiology

Diversity and evolution of bioenergetic systems involved in microbial nitrogen compound transformations

(2012) Jörg Simon et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

SINA: Accurate high-throughput multiple sequence alignment of ribosomal RNA genes

(2012) Elmar Pruesse et al.   BIOINFORMATICS

The unaccounted yet abundant nitrous oxide-reducing microbial community: a potential nitrous oxide sink

(2012) Christopher M Jones et al.   ISME Journal

Unexpected nondenitrifier nitrous oxide reductase gene diversity and abundance in soils

(2012) R. A. Sanford et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Nitric oxide and nitrous oxide turnover in natural and engineered microbial communities: biological pathways, chemical reactions, and novel technologies

(2012) Frank Schreiber et al.   Frontiers in Microbiology

Barcoded Primers Used in Multiplex Amplicon Pyrosequencing Bias Amplification

(2011) David Berry et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

Phenotypic and genotypic heterogeneity among closely related soil-borne N2- and N2O-producing Bacillus isolates harboring the nosZ gene

(2011) Christopher M. Jones et al.   FEMS MICROBIOLOGY ECOLOGY

Expression of nitrous oxide reductase in Paracoccus denitrificans is regulated by oxygen and nitric oxide through FnrP and NNR

(2011) L. Bergaust et al.   MICROBIOLOGY-SGM

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments

(2010) Morgan N. Price et al.   PLoS One

Enrichment of a Mixed Bacterial Culture with a High Polyhydroxyalkanoate Storage Capacity

(2009) Katja Johnson et al.   BIOMACROMOLECULES

Nitrous Oxide (N2O): The Dominant Ozone-Depleting Substance Emitted in the 21st Century

(2009) A. R. Ravishankara et al.   SCIENCE