Restoration with pioneer plants changes soil properties and remodels the diversity and structure of bacterial communities in rhizosphere and bulk soil of copper mine tailings in Jiangxi Province, China

Environment and geographic distance differ in relative importance for determining fungal community of rhizosphere and bulk soil

(2017) Kaoping Zhang et al.   ENVIRONMENTAL MICROBIOLOGY

Salinity and macrophyte drive the biogeography of the sedimentary bacterial communities in a brackish water tropical coastal lagoon

(2017) Pratiksha Behera et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Changes in microbial community composition following phytostabilization of an extremely acidic Cu mine tailings

(2017) Tao-tao Yang et al.   SOIL BIOLOGY & BIOCHEMISTRY

Community Structure, Species Variation, and Potential Functions of Rhizosphere-Associated Bacteria of Different Winter Wheat (Triticum aestivum) Cultivars

(2017) Aaron K. Mahoney et al.   Frontiers in Plant Science

Bacterial communities in oil contaminated soils: Biogeography and co-occurrence patterns

(2016) Shuo Jiao et al.   SOIL BIOLOGY & BIOCHEMISTRY

Environmental Controls Over Actinobacteria Communities in Ecological Sensitive Yanshan Mountains Zone

(2016) Hui Tang et al.   Frontiers in Microbiology

The Effect of Root Exudate 7,4′-Dihydroxyflavone and Naringenin on Soil Bacterial Community Structure

(2016) Márton Szoboszlay et al.   PLoS One

Ecological restoration alters microbial communities in mine tailings profiles

(2016) Yang Li et al.   Scientific Reports

Comparative study of diversity based on heat tolerant-related morpho-physiological traits and molecular markers in tall fescue accessions

(2015) Xiaoyan Sun et al.   Scientific Reports

Prokaryotes in Subsoil—Evidence for a Strong Spatial Separation of Different Phyla by Analysing Co-occurrence Networks

(2015) Marie Uksa et al.   Frontiers in Microbiology

Reclamation of lignite mine areas with Triticum aestivum: The dynamics of soil functions and microbial communities

(2014) Anna Mastrogianni et al.   APPLIED SOIL ECOLOGY

Bacterial diversity in response to direct revegetation in the Pb–Zn–Cu tailings under subtropical and semi-arid conditions

(2014) Xiaofang Li et al.   ECOLOGICAL ENGINEERING

Changes in the composition and diversity of bacterial communities 13 years after soil reclamation of abandoned mine land in eastern China

(2014) Yuanyuan Li et al.   ECOLOGICAL RESEARCH

Effect of Vegetation Succession on Organic Carbon, Carbon of Humus Acids and Dissolved Organic Carbon in Soils of Copper Mine Tailings Sites

(2014) Zhang-Jum SHEN et al.   PEDOSPHERE

Microbial diversity at the moderate acidic stage in three different sulfidic mine tailings dumps generating acid mine drainage

(2014) Hananeh Korehi et al.   RESEARCH IN MICROBIOLOGY

Different pioneer plant species select specific rhizosphere bacterial communities in a high mountain environment

(2014) Sonia Ciccazzo et al.   SpringerPlus

Development of a Dual-Index Sequencing Strategy and Curation Pipeline for Analyzing Amplicon Sequence Data on the MiSeq Illumina Sequencing Platform

(2013) James J. Kozich et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Tree species identity has little impact on the structure of soil bacterial communities in a 10-year-old tropical tree plantation

(2013) Taiga Yamamura et al.   BIOLOGY AND FERTILITY OF SOILS

Shifts in microbial community composition and function in the acidification of a lead/zinc mine tailings

(2013) Lin-xing Chen et al.   ENVIRONMENTAL MICROBIOLOGY

Rhizosphere microbiome assemblage is affected by plant development

(2013) Jacqueline M Chaparro et al.   ISME Journal

Soil microbial community under a nurse-plant species changes in composition, biomass and activity as the nurse grows

(2013) S. Hortal et al.   SOIL BIOLOGY & BIOCHEMISTRY

Plant growth-promoting rhizobacteria and root system functioning

(2013) Jordan Vacheron et al.   Frontiers in Plant Science

Community genomic analyses constrain the distribution of metabolic traits across the Chloroflexi phylum and indicate roles in sediment carbon cycling

(2013) Laura A Hug et al.   Microbiome

Is rhizosphere remediation sufficient for sustainable revegetation of mine tailings?

(2012) Longbin Huang et al.   ANNALS OF BOTANY

Diversity of microorganisms from forest soils differently polluted with heavy metals

(2012) Marcin Chodak et al.   APPLIED SOIL ECOLOGY

Lateral gene transfer between theBacteroidetesandAcidobacteria: The case of α-l-rhamnosidases

(2012) Daniil G. Naumoff et al.   FEBS LETTERS

Comparative genomic and physiological analysis provides insights into the role ofAcidobacteriain organic carbon utilization in Arctic tundra soils

(2012) Suman R. Rawat et al.   FEMS MICROBIOLOGY ECOLOGY

Possible contribution of Bradyrhizobium on nitrogen fixation in sweet potatoes

(2012) Junko Terakado-Tonooka et al.   PLANT AND SOIL

Exposure of Soil Microbial Communities to Chromium and Arsenic Alters Their Diversity and Structure

(2012) Cody S. Sheik et al.   PLoS One

Dominant trees affect microbial community composition and activity in post-mining afforested soils

(2012) Jaroslav Šnajdr et al.   SOIL BIOLOGY & BIOCHEMISTRY

Effect of plant species on the function and structure of the bacterial community in the rhizosphere of lead–zinc mine tailings in Zhejiang, China

(2011) Junmin Li et al.   CANADIAN JOURNAL OF MICROBIOLOGY

Sustainable natural remediation of abandoned tailings by metal-excluding heather (Calluna vulgaris) and gorse (Ulex europaeus), Carnon Valley, Cornwall, UK

(2011) Bernd G. Lottermoser et al.   ECOLOGICAL ENGINEERING

Massively parallel rRNA gene sequencing exacerbates the potential for biased community diversity comparisons due to variable library sizes

(2011) Thomas M. Gihring et al.   ENVIRONMENTAL MICROBIOLOGY

The development of soil organic matter in restored biodiverse Jarrah forests of South-Western Australia as determined by ASE and GCMS

(2011) Deborah S. Lin et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

Soil and plant factors driving the community of soil-borne microorganisms across chronosequences of secondary succession of chalk grasslands with a neutral pH

(2011) Eiko Kuramae et al.   FEMS MICROBIOLOGY ECOLOGY

Biodiversity, abundance, and activity of nitrogen-fixing bacteria during primary succession on a copper mine tailings

(2011) Li-Nan Huang et al.   FEMS MICROBIOLOGY ECOLOGY

Influence of land-use intensity on the spatial distribution of N-cycling microorganisms in grassland soils

(2011) Daniel Keil et al.   FEMS MICROBIOLOGY ECOLOGY

Bacterial communities associated with a mineral weathering profile at a sulphidic mine tailings dump in arid Western Australia

(2011) Steven A. Wakelin et al.   FEMS MICROBIOLOGY ECOLOGY

Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons

(2011) B. J. Haas et al.   GENOME RESEARCH

High-throughput screening of microbial adaptation to environmental stress

(2011) Pier-Anne Bélanger et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Diversity of free-living nitrogen-fixing microorganisms in the rhizosphere and non-rhizosphere of pioneer plants growing on wastelands of copper mine tailings

(2011) Jing Zhan et al.   MICROBIOLOGICAL RESEARCH

Metagenomic biomarker discovery and explanation

(2011) Nicola Segata et al.   GENOME BIOLOGY

Effect of texture and tree species on microbial properties of mine soils

(2010) Marcin Chodak et al.   APPLIED SOIL ECOLOGY

Are root exudates more important than other sources of rhizodeposits in structuring rhizosphere bacterial communities?

(2010) Paul G. Dennis et al.   FEMS MICROBIOLOGY ECOLOGY

The biogeochemistry and microbiology of sulfidic mine waste and bioleaching dumps and heaps, and novel Fe(II)-oxidizing bacteria

(2010) A. Schippers et al.   HYDROMETALLURGY

Life history determines biogeographical patterns of soil bacterial communities over multiple spatial scales

(2010) A. BISSETT et al.   MOLECULAR ECOLOGY

Pyrosequencing-Based Assessment of Soil pH as a Predictor of Soil Bacterial Community Structure at the Continental Scale

(2009) C. L. Lauber et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

PyNAST: a flexible tool for aligning sequences to a template alignment

(2009) J. G. Caporaso et al.   BIOINFORMATICS

Water chemistry and heavy metal distribution in an AMD highly contaminated river

(2009) H. Y. Xiao et al.   Environmental Earth Sciences

Plant species and soil type cooperatively shape the structure and function of microbial communities in the rhizosphere

(2009) Gabriele Berg et al.   FEMS MICROBIOLOGY ECOLOGY

Abundance, composition, diversity and novelty of soil Proteobacteria

(2009) Anne M Spain et al.   ISME Journal

Influence of Arabidopsis thaliana accessions on rhizobacterial communities and natural variation in root exudates

(2009) Shirley A. Micallef et al.   JOURNAL OF EXPERIMENTAL BOTANY

Vegetation Affects the Relative Abundances of Dominant Soil Bacterial Taxa and Soil Respiration Rates in an Upland Grassland Soil

(2009) Bruce C. Thomson et al.   MICROBIAL ECOLOGY

Plant biomass, soil water content and soil N:P ratio regulating soil microbial functional diversity in a temperate steppe: A regional scale study

(2009) Zhanfeng Liu et al.   SOIL BIOLOGY & BIOCHEMISTRY

Biochemical and genomic comparison of inorganic phosphate solubilization in Pseudomonas species

(2009) Simon H. Miller et al.   Environmental Microbiology Reports

Characterization of a Bacterial Community in an Abandoned Semiarid Lead-Zinc Mine Tailing Site

(2008) M. O. Mendez et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Plant host habitat and root exudates shape soil bacterial community structure

(2008) Feth el Zahar Haichar et al.   ISME Journal

Substrate-induced growth and isolation of Acidobacteria from acidic Sphagnum peat

(2008) Timofei A Pankratov et al.   ISME Journal

Rates of litter decomposition in terrestrial ecosystems: global patterns and controlling factors

(2008) Deqiang Zhang et al.   Journal of Plant Ecology