Genome re-sequencing and simple sequence repeat markers reveal the existence of divergent lineages in the Canadian Puccinia striiformis f. sp. tritici population with extensive DNA methylation

Virulence and Molecular Characterization of Experimental Isolates of the Stripe Rust Pathogen (Puccinia striiformis) Indicate Somatic Recombination

(2017) Yu Lei et al.   PHYTOPATHOLOGY

Yellow Rust Epidemics Worldwide Were Caused by Pathogen Races from Divergent Genetic Lineages

(2017) Sajid Ali et al.   Frontiers in Plant Science

Secreted protein gene derived-single nucleotide polymorphisms (SP-SNPs) reveal population diversity and differentiation of Puccinia striiformis f. sp. tritici in the United States

(2016) Chongjing Xia et al.   Fungal Biology

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

(2016) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

Race Characterization of Puccinia striiformis f. sp. tritici, the Cause of Wheat Stripe Rust, in Saskatchewan and Southern Alberta, Canada and Virulence Comparison with Races from the United States

(2016) G. S. Brar et al.   PLANT DISEASE

Molecular markers for tracking the origin and worldwide distribution of invasive strains ofPuccinia striiformis

(2016) Stephanie Walter et al.   Ecology and Evolution

Comparative Analysis of DNA Methyltransferase Gene Family in Fungi: A Focus on Basidiomycota

(2016) Ruirui Huang et al.   Frontiers in Plant Science

Whole genome comparative analysis of transposable elements provides new insight into mechanisms of their inactivation in fungal genomes

(2015) Joëlle Amselem et al.   BMC GENOMICS

The Pfam protein families database: towards a more sustainable future

(2015) Robert D. Finn et al.   NUCLEIC ACIDS RESEARCH

First report of stripe rust (Puccinia striiformis f. sp. tritici) on wheat in Quebec, Canada

(2015) Sylvie Rioux et al.   PHYTOPROTECTION

Barberry Does Not Function as an Alternate Host for Puccinia striiformis f. sp. tritici in the U. S. Pacific Northwest Due to Teliospore Degradation and Barberry Phenology

(2015) M. N. Wang et al.   PLANT DISEASE

Replacement of the European wheat yellow rust population by new races from the centre of diversity in the near-Himalayan region

(2015) M. S. Hovmøller et al.   PLANT PATHOLOGY

Genome-wide profiling of DNA methylation provides insights into epigenetic regulation of fungal development in a plant pathogenic fungus, Magnaporthe oryzae

(2015) Junhyun Jeon et al.   Scientific Reports

Field pathogenomics reveals the emergence of a diverse wheat yellow rust population

(2015) Amelia Hubbard et al.   GENOME BIOLOGY

Cytosine DNA Methylation Is Found in Drosophila melanogaster but Absent in Saccharomyces cerevisiae, Schizosaccharomyces pombe, and Other Yeast Species

(2014) Floriana Capuano et al.   ANALYTICAL CHEMISTRY

Sexual structures and recombination of the wheat rust fungus Puccinia striiformis on Berberis vulgaris

(2014) Julian Rodriguez-Algaba et al.   FUNGAL GENETICS AND BIOLOGY

Virulence and Molecular Analyses Support Asexual Reproduction of Puccinia striiformis f. sp. tritici in the U.S. Pacific Northwest

(2014) P. Cheng et al.   PHYTOPATHOLOGY

Epigenetic Control of Effector Gene Expression in the Plant Pathogenic Fungus Leptosphaeria maculans

(2014) Jessica L. Soyer et al.   PLoS Genetics

Origin, Migration Routes and Worldwide Population Genetic Structure of the Wheat Yellow Rust Pathogen Puccinia striiformis f.sp. tritici

(2014) Sajid Ali et al.   PLoS Pathogens

Genome analyses of the wheat yellow (stripe) rust pathogen Puccinia striiformis f. sp. tritici reveal polymorphic and haustorial expressed secreted proteins as candidate effectors

(2013) Dario Cantu et al.   BMC GENOMICS

Virulence phenotypes ofPuccinia striiformisin Alberta from 2009–2011

(2013) Michael D. Holtz et al.   CANADIAN JOURNAL OF PLANT PATHOLOGY

Inferring the contribution of sexual reproduction, migration and off-season survival to the temporal maintenance of microbial populations: a case study on the wheat fungal pathogenPuccinia striiformisf.sp.tritici

(2013) Sajid Ali et al.   MOLECULAR ECOLOGY

Identification of Eighteen Berberis Species as Alternate Hosts of Puccinia striiformis f. sp. tritici and Virulence Variation in the Pathogen Isolates from Natural Infection of Barberry Plants in China

(2013) Jie Zhao et al.   PHYTOPATHOLOGY

First Report of Oregon Grape (Mahonia aquifolium) as an Alternate Host for the Wheat Stripe Rust Pathogen (Puccinia striiformis f. sp. tritici) Under Artificial Inoculation

(2013) M. N. Wang et al.   PLANT DISEASE

Genetic diversity ofPuccinia striiformisfrom cereals in Alberta, Canada

(2013) M. D. Holtz et al.   PLANT PATHOLOGY

Transgenerational gene silencing causes gain of virulence in a plant pathogen

(2013) Dinah Qutob et al.   Nature Communications

High genome heterozygosity and endemic genetic recombination in the wheat stripe rust fungus

(2013) Wenming Zheng et al.   Nature Communications

Widespread Existence of Cytosine Methylation in Yeast DNA Measured by Gas Chromatography/Mass Spectrometry

(2012) Yang Tang et al.   ANALYTICAL CHEMISTRY

Virulence ofPuccinia striiformison wheat and barley in central Alberta

(2012) K. Kumar et al.   CANADIAN JOURNAL OF PLANT PATHOLOGY

A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff

(2012) Pablo Cingolani et al.   FLY

A sensitive mass spectrometry method for simultaneous quantification of DNA methylation and hydroxymethylation levels in biological samples

(2011) Thuc Le et al.   ANALYTICAL BIOCHEMISTRY

Somatic Hybridization in the Uredinales

(2011) Robert F. Park et al.   Annual Review of Phytopathology

SNPs Occur in Regions with Less Genomic Sequence Conservation

(2011) John C. Castle   PLoS One

RDP3: a flexible and fast computer program for analyzing recombination

(2010) D. P. Martin et al.   BIOINFORMATICS

Discriminant analysis of principal components: a new method for the analysis of genetically structured populations

(2010) Thibaut Jombart et al.   BMC GENETICS

Virulence races ofPuccinia striiformisf. sp.triticiin 2006 and 2007 and development of wheat stripe rust and distributions, dynamics, and evolutionary relationships of races from 2000 to 2007 in the United States

(2010) Xianming Chen et al.   CANADIAN JOURNAL OF PLANT PATHOLOGY

Reduction in the sex ability of worldwide clonal populations of Puccinia striiformis f.sp. tritici

(2010) Sajid Ali et al.   FUNGAL GENETICS AND BIOLOGY

Century-Old Mystery of Puccinia striiformis Life History Solved with the Identification of Berberis as an Alternate Host

(2010) Yue Jin et al.   PHYTOPATHOLOGY

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Multiple introductions of divergent genetic lineages in an invasive fungal pathogen, Cryphonectria parasitica, in France

(2009) C Dutech et al.   HEREDITY

Repeat-Induced Point Mutation (RIP) as an Alternative Mechanism of Evolution Toward Virulence inLeptosphaeria maculans

(2009) Isabelle Fudal et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Rapid global spread of two aggressive strains of a wheat rust fungus

(2008) MOGENS S. HOVMØLLER et al.   MOLECULAR ECOLOGY

Emergence of a Novel Population of Puccinia striiformis f. sp. tritici in Eastern United States

(2008) S. G. Markell et al.   PHYTOPATHOLOGY