NvERTx: a gene expression database to compare embryogenesis and regeneration in the sea anemoneNematostella vectensis
出版年份 2018 全文链接
标题
NvERTx: a gene expression database to compare embryogenesis and regeneration in the sea anemoneNematostella vectensis
作者
关键词
-
出版物
DEVELOPMENT
Volume 145, Issue 10, Pages dev162867
出版商
The Company of Biologists
发表日期
2018-05-08
DOI
10.1242/dev.162867
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- A Tissue-Mapped Axolotl De Novo Transcriptome Enables Identification of Limb Regeneration Factors
- (2017) Donald M. Bryant et al. Cell Reports
- PaperBLAST: Text Mining Papers for Information about Homologs
- (2017) Morgan N. Price et al. mSystems
- The role of microRNAs in cardiac development and regenerative capacity
- (2016) Michael G. Katz et al. AMERICAN JOURNAL OF PHYSIOLOGY-HEART AND CIRCULATORY PHYSIOLOGY
- A transcriptional time-course analysis of oral vs. aboral whole-body regeneration in the Sea anemone Nematostella vectensis
- (2016) Amos A. Schaffer et al. BMC GENOMICS
- Development of the aboral domain inNematostellarequiresβ-cateninand the opposing activities ofSix3/6andFrizzled5/8
- (2016) Lucas Leclère et al. DEVELOPMENT
- The rise of the starlet sea anemone Nematostella vectensis as a model system to investigate development and regeneration
- (2016) Michael J. Layden et al. Wiley Interdisciplinary Reviews-Developmental Biology
- Characterization of Morphological and Cellular Events Underlying Oral Regeneration in the Sea Anemone, Nematostella vectensis
- (2015) Aldine Amiel et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- Recent advances in genomics and transcriptomics of cnidarians
- (2015) Ulrich Technau et al. Marine Genomics
- Axis Patterning by BMPs: Cnidarian Network Reveals Evolutionary Constraints
- (2015) Grigory Genikhovich et al. Cell Reports
- Trimmomatic: a flexible trimmer for Illumina sequence data
- (2014) Anthony M. Bolger et al. BIOINFORMATICS
- Populations of a cyprinid fish are self-sustaining despite widespread feminization of males
- (2014) Patrick B Hamilton et al. BMC BIOLOGY
- Distal expression of sprouty (spry) genes during Xenopus laevis limb development and regeneration
- (2014) Yi-Hsuan Wang et al. GENE EXPRESSION PATTERNS
- SeaBase: A Multispecies Transcriptomic Resource and Platform for Gene Network Inference
- (2014) A. H. L. Fischer et al. INTEGRATIVE AND COMPARATIVE BIOLOGY
- Non-canonical Notch signaling represents an ancestral mechanism to regulate neural differentiation
- (2014) Michael J Layden et al. EvoDevo
- Characterization of differential transcript abundance through time during Nematostella vectensis development
- (2013) Rebecca Helm et al. BMC GENOMICS
- A staging system for the regeneration of a polyp from the aboral physa of the anthozoan CnidarianNematostella vectensis
- (2013) Patricia E. Bossert et al. DEVELOPMENTAL DYNAMICS
- Perineurial Glia Require Notch Signaling during Motor Nerve Development but Not Regeneration
- (2013) L. A. Binari et al. JOURNAL OF NEUROSCIENCE
- Microinjection of mRNA or morpholinos for reverse genetic analysis in the starlet sea anemone, Nematostella vectensis
- (2013) Michael J Layden et al. Nature Protocols
- De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis
- (2013) Brian J Haas et al. Nature Protocols
- Comparative Transcriptional Profiling of the Axolotl Limb Identifies a Tripartite Regeneration-Specific Gene Program
- (2013) Dunja Knapp et al. PLoS One
- A quantitative reference transcriptome for Nematostella vectensis early embryonic development: a pipeline for de novo assembly in emerging model systems
- (2013) Sarah Tulin et al. EvoDevo
- A de novo assembly of the newt transcriptome combined with proteomic validation identifies new protein families expressed during tissue regeneration
- (2013) Mario Looso et al. GENOME BIOLOGY
- The sva package for removing batch effects and other unwanted variation in high-throughput experiments
- (2012) Jeffrey T. Leek et al. BIOINFORMATICS
- Cell proliferation is necessary for the regeneration of oral structures in the anthozoan cnidarian Nematostella vectensis
- (2012) Yale J Passamaneck et al. BMC DEVELOPMENTAL BIOLOGY
- Nematostella vectensis achaete-scute homolog NvashA regulates embryonic ectodermal neurogenesis and represents an ancient component of the metazoan neural specification pathway
- (2012) M. J. Layden et al. DEVELOPMENT
- Regeneration of the elbow joint in the developing chick embryo recapitulates development
- (2012) B. Duygu Özpolat et al. DEVELOPMENTAL BIOLOGY
- The simple fool's guide to population genomics via RNA-Seq: an introduction to high-throughput sequencing data analysis
- (2012) Pierre De Wit et al. Molecular Ecology Resources
- A Framework for the Establishment of a Cnidarian Gene Regulatory Network for “Endomesoderm” Specification: The Inputs of ß-Catenin/TCF Signaling
- (2012) Eric Röttinger et al. PLoS Genetics
- RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome
- (2011) Bo Li et al. BMC BIOINFORMATICS
- Interkinetic Nuclear Migration Is a Broadly Conserved Feature of Cell Division in Pseudostratified Epithelia
- (2011) Emily J. Meyer et al. CURRENT BIOLOGY
- Induction of canonical Wnt signaling by alsterpaullone is sufficient for oral tissue fate during regeneration and embryogenesis in Nematostella vectensis
- (2011) Michael Trevino et al. DEVELOPMENTAL DYNAMICS
- REVIGO Summarizes and Visualizes Long Lists of Gene Ontology Terms
- (2011) Fran Supek et al. PLoS One
- A comparative gene expression database for invertebrates
- (2011) Mattias Ormestad et al. EvoDevo
- edgeR: a Bioconductor package for differential expression analysis of digital gene expression data
- (2009) M. D. Robinson et al. BIOINFORMATICS
- PLAST: parallel local alignment search tool for database comparison
- (2009) Van Hoa Nguyen et al. BMC BIOINFORMATICS
- Conserved and novel gene expression between regeneration and asexual fission in Nematostella vectensis
- (2009) Patrick M. Burton et al. DEVELOPMENT GENES AND EVOLUTION
- Sox2 is required for maintenance and regeneration, but not initial development, of hair cells in the zebrafish inner ear
- (2009) Bonny B. Millimaki et al. DEVELOPMENTAL BIOLOGY
- Comparative Expression Profiling Reveals an Essential Role for Raldh2 in Epimorphic Regeneration
- (2009) Lijoy K. Mathew et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
- (2009) Ben Langmead et al. GENOME BIOLOGY
- The Hedgehog gene family of the cnidarian, Nematostella vectensis, and implications for understanding metazoan Hedgehog pathway evolution
- (2007) David Q. Matus et al. DEVELOPMENTAL BIOLOGY
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started