An integrated -omics analysis of the epigenetic landscape of gene expression in human blood cells

Epigenome-wide association study of rheumatoid arthritis identifies differentially methylated loci in B cells

(2017) Antonio Julià et al.   HUMAN MOLECULAR GENETICS

Structural Basis for the Versatile and Methylation-Dependent Binding of CTCF to DNA

(2017) Hideharu Hashimoto et al.   MOLECULAR CELL

Epigenetic Signatures of Cigarette SmokingCLINICAL PERSPECTIVE

(2016) Roby Joehanes et al.   Circulation-Cardiovascular Genetics

Tobacco smoking is associated with DNA methylation of diabetes susceptibility genes

(2016) Symen Ligthart et al.   DIABETOLOGIA

A DNA methylation biomarker of alcohol consumption

(2016) C Liu et al.   MOLECULAR PSYCHIATRY

Epigenome-wide association study of body mass index and the adverse outcomes of adiposity

(2016) Simone Wahl et al.   NATURE

Integrative epigenome-wide analysis demonstrates that DNA methylation may mediate genetic risk in inflammatory bowel disease

(2016) N. T. Ventham et al.   Nature Communications

Epigenome-wide association study of smoking and DNA methylation in non-small cell lung neoplasms

(2016) Joshua R Freeman et al.   Oncotarget

Epigenetic Signatures of Cigarette SmokingCLINICAL PERSPECTIVE

(2016) Roby Joehanes et al.   Circulation-Cardiovascular Genetics

Type 2 diabetes and leucocyte DNA methylation: an epigenome-wide association study in over 1,500 older adults

(2015) Ines Florath et al.   DIABETOLOGIA

Systematic DNA methylation analysis of multiple cell lines reveals common and specific patterns within and across tissues of origin

(2015) Xiaofei Yang et al.   HUMAN MOLECULAR GENETICS

Integrative analysis of 111 reference human epigenomes

(2015) Anshul Kundaje et al.   NATURE

Genomic profiling of DNA methyltransferases reveals a role for DNMT3B in genic methylation

(2015) Tuncay Baubec et al.   NATURE

RNA-mediated epigenetic regulation of gene expression

(2015) Daniel Holoch et al.   NATURE REVIEWS GENETICS

Ensembl 2016

(2015) Andrew Yates et al.   NUCLEIC ACIDS RESEARCH

On the presence and role of human gene-body DNA methylation

(2015) Daudi Jjingo et al.   Oncotarget

Gene Body Methylation Can Alter Gene Expression and Is a Therapeutic Target in Cancer

(2014) Xiaojing Yang et al.   CANCER CELL

A 3D Map of the Human Genome at Kilobase Resolution Reveals Principles of Chromatin Looping

(2014) Suhas S.P. Rao et al.   CELL

Recurrent epimutations activate gene body promoters in primary glioblastoma

(2014) R. P. Nagarajan et al.   GENOME RESEARCH

MicroRNA-148a is silenced by hypermethylation and interacts with DNA methyltransferase 1 in hepatocellular carcinogenesis

(2014) XIAO-RAN LONG et al.   INTERNATIONAL JOURNAL OF ONCOLOGY

Effectively identifying regulatory hotspots while capturing expression heterogeneity in gene expression studies

(2014) Jong J Joo et al.   GENOME BIOLOGY

The relationship between DNA methylation, genetic and expression inter-individual variation in untransformed human fibroblasts

(2014) James R Wagner et al.   GENOME BIOLOGY

Novel region discovery method for Infinium 450K DNA methylation data reveals changes associated with aging in muscle and neuronal pathways

(2013) Mei-Lyn Ong et al.   AGING CELL

Global Analysis of DNA Methylation Variation in Adipose Tissue from Twins Reveals Links to Disease-Associated Variants in Distal Regulatory Elements

(2013) Elin Grundberg et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Dynamic DNA methylation across diverse human cell lines and tissues

(2013) K. E. Varley et al.   GENOME RESEARCH

Methylomics of gene expression in human monocytes

(2013) Yongmei Liu et al.   HUMAN MOLECULAR GENETICS

Discovering high-resolution patterns of differential DNA methylation that correlate with gene expression changes

(2013) Nathan D. VanderKraats et al.   NUCLEIC ACIDS RESEARCH

RefSeq: an update on mammalian reference sequences

(2013) Kim D. Pruitt et al.   NUCLEIC ACIDS RESEARCH

DNA methylation of distal regulatory sites characterizes dysregulation of cancer genes

(2013) Dvir Aran et al.   GENOME BIOLOGY

DNA methylation arrays as surrogate measures of cell mixture distribution

(2012) Eugene Houseman et al.   BMC BIOINFORMATICS

Genetic analysis of DNA methylation and gene expression levels in whole blood of healthy human subjects

(2012) Kristel R van Eijk et al.   BMC GENOMICS

Genome-wide peripheral blood leukocyte DNA methylation microarrays identified a single association with inflammatory bowel diseases

(2012) Alan R. Harris et al.   INFLAMMATORY BOWEL DISEASES

An integrated encyclopedia of DNA elements in the human genome

(2012)   NATURE

ChromHMM: automating chromatin-state discovery and characterization

(2012) Jason Ernst et al.   NATURE METHODS

Functions of DNA methylation: islands, start sites, gene bodies and beyond

(2012) Peter A. Jones   NATURE REVIEWS GENETICS

MicroRNAs and their targets: recognition, regulation and an emerging reciprocal relationship

(2012) Amy E. Pasquinelli   NATURE REVIEWS GENETICS

Differential DNA Methylation in Purified Human Blood Cells: Implications for Cell Lineage and Studies on Disease Susceptibility

(2012) Lovisa E. Reinius et al.   PLoS One

Functional and Mechanistic Diversity of Distal Transcription Enhancers

(2011) Michael Bulger et al.   CELL

DNA methylation patterns associate with genetic and gene expression variation in HapMap cell lines

(2011) Jordana T Bell et al.   GENOME BIOLOGY

Identification of disease-associated DNA methylation in intestinal tissues from patients with inflammatory bowel disease

(2010) Z Lin et al.   CLINICAL GENETICS

Conserved role of intragenic DNA methylation in regulating alternative promoters

(2010) Alika K. Maunakea et al.   NATURE

Trauma exposure and stress-related disorders in inner city primary care patients

(2009) Charles F. Gillespie et al.   GENERAL HOSPITAL PSYCHIATRY

Human DNA methylomes at base resolution show widespread epigenomic differences

(2009) Ryan Lister et al.   NATURE

Targeted and genome-scale strategies reveal gene-body methylation signatures in human cells

(2009) Madeleine P Ball et al.   NATURE BIOTECHNOLOGY