标题
Functions of DNA methylation: islands, start sites, gene bodies and beyond
作者
关键词
-
出版物
NATURE REVIEWS GENETICS
Volume 13, Issue 7, Pages 484-492
出版商
Springer Nature
发表日期
2012-05-29
DOI
10.1038/nrg3230
参考文献
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- Dominantly Inherited Constitutional Epigenetic Silencing of MLH1 in a Cancer-Affected Family Is Linked to a Single Nucleotide Variant within the 5′UTR
- (2011) Megan P. Hitchins et al. CANCER CELL
- Thymine DNA Glycosylase Is Essential for Active DNA Demethylation by Linked Deamination-Base Excision Repair
- (2011) Salvatore Cortellino et al. CELL
- Polycomb-Repressed Genes Have Permissive Enhancers that Initiate Reprogramming
- (2011) Phillippa C. Taberlay et al. CELL
- DNA methylation status predicts cell type-specific enhancer activity
- (2011) Malgorzata Wiench et al. EMBO JOURNAL
- DNA methylation: TET proteins—guardians of CpG islands?
- (2011) Kristine Williams et al. EMBO REPORTS
- Mechanisms and functions of Tet protein-mediated 5-methylcytosine oxidation
- (2011) H. Wu et al. GENES & DEVELOPMENT
- DNA methylation directly silences genes with non-CpG island promoters and establishes a nucleosome occupied promoter
- (2011) Han Han et al. HUMAN MOLECULAR GENETICS
- ICF Syndrome Mutations Cause a Broad Spectrum of Biochemical Defects in DNMT3B-Mediated De Novo DNA Methylation
- (2011) Amir H. Moarefi et al. JOURNAL OF MOLECULAR BIOLOGY
- CTCF-promoted RNA polymerase II pausing links DNA methylation to splicing
- (2011) Sanjeev Shukla et al. NATURE
- Embryonic lethal phenotype reveals a function of TDG in maintaining epigenetic stability
- (2011) Daniel Cortázar et al. NATURE
- The role of Tet3 DNA dioxygenase in epigenetic reprogramming by oocytes
- (2011) Tian-Peng Gu et al. NATURE
- TET1 and hydroxymethylcytosine in transcription and DNA methylation fidelity
- (2011) Kristine Williams et al. NATURE
- Dynamic regulation of 5-hydroxymethylcytosine in mouse ES cells and during differentiation
- (2011) Gabriella Ficz et al. NATURE
- Integrated genomic analyses of ovarian carcinoma
- (2011) D. Bell et al. NATURE
- Dnmt3a is essential for hematopoietic stem cell differentiation
- (2011) Grant A Challen et al. NATURE GENETICS
- Dynamic CpG island methylation landscape in oocytes and preimplantation embryos
- (2011) Sébastien A Smallwood et al. NATURE GENETICS
- Enhancer function: new insights into the regulation of tissue-specific gene expression
- (2011) Chin-Tong Ong et al. NATURE REVIEWS GENETICS
- Relationship between Gene Body DNA Methylation and Intragenic H3K9me3 and H3K36me3 Chromatin Marks
- (2011) Maria A. Hahn et al. PLoS One
- OCT4 establishes and maintains nucleosome-depleted regions that provide additional layers of epigenetic regulation of its target genes
- (2011) J. S. You et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Reprogramming of the paternal genome upon fertilization involves genome-wide oxidation of 5-methylcytosine
- (2011) Khursheed Iqbal et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Replication-Dependent Loss of 5-Hydroxymethylcytosine in Mouse Preimplantation Embryos
- (2011) A. Inoue et al. SCIENCE
- 5-Hydroxymethylcytosine in the mammalian zygote is linked with epigenetic reprogramming
- (2011) Mark Wossidlo et al. Nature Communications
- Integrating 5-Hydroxymethylcytosine into the Epigenomic Landscape of Human Embryonic Stem Cells
- (2011) Keith E. Szulwach et al. PLoS Genetics
- Nucleosomes Containing Methylated DNA Stabilize DNA Methyltransferases 3A/3B and Ensure Faithful Epigenetic Inheritance
- (2011) Shikhar Sharma et al. PLoS Genetics
- A comparative analysis of DNA methylation across human embryonic stem cell lines
- (2011) Pao-Yang Chen et al. GENOME BIOLOGY
- 5-Hydroxymethylcytosine is associated with enhancers and gene bodies in human embryonic stem cells
- (2011) Hume Stroud et al. GENOME BIOLOGY
- Leukemic IDH1 and IDH2 Mutations Result in a Hypermethylation Phenotype, Disrupt TET2 Function, and Impair Hematopoietic Differentiation
- (2010) Maria E. Figueroa et al. CANCER CELL
- Changes in H2A.Z occupancy and DNA methylation during B-cell lymphomagenesis
- (2010) M. L. Conerly et al. GENOME RESEARCH
- Dynamic changes in the human methylome during differentiation
- (2010) L. Laurent et al. GENOME RESEARCH
- H2A.Z Maintenance during Mitosis Reveals Nucleosome Shifting on Mitotically Silenced Genes
- (2010) Theresa K. Kelly et al. MOLECULAR CELL
- Genome-wide erasure of DNA methylation in mouse primordial germ cells is affected by AID deficiency
- (2010) Christian Popp et al. NATURE
- CpG islands influence chromatin structure via the CpG-binding protein Cfp1
- (2010) John P. Thomson et al. NATURE
- Relationship between nucleosome positioning and DNA methylation
- (2010) Ramakrishna K. Chodavarapu et al. NATURE
- Conserved role of intragenic DNA methylation in regulating alternative promoters
- (2010) Alika K. Maunakea et al. NATURE
- Comparison of sequencing-based methods to profile DNA methylation and identification of monoallelic epigenetic modifications
- (2010) R Alan Harris et al. NATURE BIOTECHNOLOGY
- Active DNA demethylation: many roads lead to Rome
- (2010) Susan C. Wu et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- DNMT3AMutations in Acute Myeloid Leukemia
- (2010) Timothy J. Ley et al. NEW ENGLAND JOURNAL OF MEDICINE
- The Behaviour of 5-Hydroxymethylcytosine in Bisulfite Sequencing
- (2010) Yun Huang et al. PLoS One
- Conservation and divergence of methylation patterning in plants and animals
- (2010) S. Feng et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Orphan CpG Islands Identify Numerous Conserved Promoters in the Mammalian Genome
- (2010) Robert S. Illingworth et al. PLoS Genetics
- CpG islands - ‘A rough guide’
- (2009) Robert S. Illingworth et al. FEBS LETTERS
- Lineage-specific DNA methylation in T cells correlates with histone methylation and enhancer activity
- (2009) C. Schmidl et al. GENOME RESEARCH
- Human DNA methylomes at base resolution show widespread epigenomic differences
- (2009) Ryan Lister et al. NATURE
- Reprogramming towards pluripotency requires AID-dependent DNA demethylation
- (2009) Nidhi Bhutani et al. NATURE
- The human colon cancer methylome shows similar hypo- and hypermethylation at conserved tissue-specific CpG island shores
- (2009) Rafael A Irizarry et al. NATURE GENETICS
- Rethinking how DNA methylation patterns are maintained
- (2009) Peter A. Jones et al. NATURE REVIEWS GENETICS
- Chromatin organization marks exon-intron structure
- (2009) Schraga Schwartz et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- The Colorful History of Active DNA Demethylation
- (2008) Steen K.T. Ooi et al. CELL
- Highly Integrated Single-Base Resolution Maps of the Epigenome in Arabidopsis
- (2008) Ryan Lister et al. CELL
- Moving AHEAD with an international human epigenome project
- (2008) et al. NATURE
- Histone H2A.Z and DNA methylation are mutually antagonistic chromatin marks
- (2008) Daniel Zilberman et al. NATURE
- Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning
- (2008) Shawn J. Cokus et al. NATURE
- Frequent switching of Polycomb repressive marks and DNA hypermethylation in the PC3 prostate cancer cell line
- (2008) E. N. Gal-Yam et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- An Sp1/Sp3 Binding Polymorphism Confers Methylation Protection
- (2008) Yanis A. Boumber et al. PLoS Genetics
- Global Mapping of DNA Methylation in Mouse Promoters Reveals Epigenetic Reprogramming of Pluripotency Genes
- (2008) Cassandra R. Farthing et al. PLoS Genetics
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