Insights into microbial communities mediating the bioremediation of hydrocarbon-contaminated soil from an Alpine former military site

Development of bioreactors for comparative study of natural attenuation, biostimulation, and bioaugmentation of petroleum-hydrocarbon contaminated soil

(2018) Mohammad-Saeed Safdari et al.   JOURNAL OF HAZARDOUS MATERIALS

Enhanced bioremediation of nutrient-amended, petroleum hydrocarbon-contaminated soils over a cold-climate winter: The rate and extent of hydrocarbon biodegradation and microbial response in a pilot-scale biopile subjected to natural seasonal freeze-thaw temperatures

(2018) Jihun Kim et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Bacterial community shift and hydrocarbon transformation during bioremediation of short-term petroleum-contaminated soil

(2017) Manli Wu et al.   ENVIRONMENTAL POLLUTION

Genome analysis of crude oil degrading Franconibacter pulveris strain DJ34 revealed its genetic basis for hydrocarbon degradation and survival in oil contaminated environment

(2017) Siddhartha Pal et al.   GENOMICS

High-throughput metagenomic analysis of petroleum-contaminated soil microbiome reveals the versatility in xenobiotic aromatics metabolism

(2017) Yun-Juan Bao et al.   JOURNAL OF ENVIRONMENTAL SCIENCES

Seasonal soil microbial responses are limited to changes in functionality at two Alpine forest sites differing in altitude and vegetation

(2017) José A. Siles et al.   Scientific Reports

Comparative Investigation of Bacterial, Fungal, and Archaeal Community Structures in Soils in a Typical Oilfield in Jianghan, China

(2016) Zhi-Feng Zhou et al.   ARCHIVES OF ENVIRONMENTAL CONTAMINATION AND TOXICOLOGY

Reconstruction of bacterial community structure and variation for enhanced petroleum hydrocarbons degradation through biostimulation of oil contaminated soil

(2016) Aiyoub Shahi et al.   CHEMICAL ENGINEERING JOURNAL

Evaluation of microbial population and functional genes during the bioremediation of petroleum-contaminated soil as an effective monitoring approach

(2016) Aiyoub Shahi et al.   ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY

Bioaugmentation and biostimulation of hydrocarbon degradation and the microbial community in a petroleum-contaminated soil

(2016) Manli Wu et al.   INTERNATIONAL BIODETERIORATION & BIODEGRADATION

The ecological and physiological responses of the microbial community from a semiarid soil to hydrocarbon contamination and its bioremediation using compost amendment

(2016) F. Bastida et al.   Journal of Proteomics

Abundance and Diversity of Bacterial, Archaeal, and Fungal Communities Along an Altitudinal Gradient in Alpine Forest Soils: What Are the Driving Factors?

(2016) José A. Siles et al.   MICROBIAL ECOLOGY

Fungal identification using a Bayesian classifier and the Warcup training set of internal transcribed spacer sequences

(2016) Vinita Deshpande et al.   MYCOLOGIA

Comparative assessment of fungal augmentation treatments of a fine-textured and historically oil-contaminated soil

(2016) Stefano Covino et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Bioremediation techniques–classification based on site of application: principles, advantages, limitations and prospects

(2016) Christopher Chibueze Azubuike et al.   WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY

Response of Core Microbial Consortia to Chronic Hydrocarbon Contaminations in Coastal Sediment Habitats

(2016) Mathilde Jeanbille et al.   Frontiers in Microbiology

Community Structure in Methanogenic Enrichments Provides Insight into Syntrophic Interactions in Hydrocarbon-Impacted Environments

(2016) S. Jane Fowler et al.   Frontiers in Microbiology

The Interaction between Plants and Bacteria in the Remediation of Petroleum Hydrocarbons: An Environmental Perspective

(2016) Panagiotis Gkorezis et al.   Frontiers in Microbiology

Biostimulation of Indigenous Microbial Community for Bioremediation of Petroleum Refinery Sludge

(2016) Jayeeta Sarkar et al.   Frontiers in Microbiology

Potential of non-ligninolytic fungi in bioremediation of chlorinated and polycyclic aromatic hydrocarbons

(2015) Ernest Marco-Urrea et al.   New Biotechnology

Continental-scale distributions of dust-associated bacteria and fungi

(2015) Albert Barberán et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Kinetic and multidimensional profiling of accelerated degradation of oil sludge by biostimulation

(2015) Yijie Dong et al.   Environmental Science-Processes & Impacts

Improved Bacterial 16S rRNA Gene (V4 and V4-5) and Fungal Internal Transcribed Spacer Marker Gene Primers for Microbial Community Surveys

(2015) William Walters et al.   mSystems

Metagenomics of petroleum muck: revealing microbial diversity and depicting microbial syntrophy

(2014) Madhvi N. Joshi et al.   ARCHIVES OF MICROBIOLOGY

Microbial diversity, community composition and metabolic potential in hydrocarbon contaminated oily sludge: prospects for in situ bioremediation

(2014) Ranjit Das et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

Altitudinal Distribution Patterns of Soil Bacterial and Archaeal Communities Along Mt. Shegyla on the Tibetan Plateau

(2014) Jun-Tao Wang et al.   MICROBIAL ECOLOGY

Characterization of culturable heterotrophic bacteria in hydrocarbon-contaminated soil from an alpine former military site

(2014) Dechao Zhang et al.   WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY

Bacterial diversity and community structure along different peat soils in boreal forest

(2013) Hui Sun et al.   APPLIED SOIL ECOLOGY

Study on bioadsorption and biodegradation of petroleum hydrocarbons by a microbial consortium

(2013) Nana Xu et al.   BIORESOURCE TECHNOLOGY

A feasibility study on the bioremediation of hydrocarbon-contaminated soil from an Alpine former military site: Effects of temperature and biostimulation

(2013) J. Mair et al.   COLD REGIONS SCIENCE AND TECHNOLOGY

Bioremediation of petroleum-contaminated soil by biostimulation amended with biochar

(2013) Gang Qin et al.   INTERNATIONAL BIODETERIORATION & BIODEGRADATION

UPARSE: highly accurate OTU sequences from microbial amplicon reads

(2013) Robert C Edgar   NATURE METHODS

Ribosomal Database Project: data and tools for high throughput rRNA analysis

(2013) James R. Cole et al.   NUCLEIC ACIDS RESEARCH

Effect of Sugarcane Burning or Green Harvest Methods on the Brazilian Cerrado Soil Bacterial Community Structure

(2013) Caio T. C. C. Rachid et al.   PLoS One

Active microorganisms in soil: Critical review of estimation criteria and approaches

(2013) Evgenia Blagodatskaya et al.   SOIL BIOLOGY & BIOCHEMISTRY

Impact of Long-Term Diesel Contamination on Soil Microbial Community Structure

(2012) Nora B. Sutton et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Pyrosequence analyses of bacterial communities during simulated in situ bioremediation of polycyclic aromatic hydrocarbon-contaminated soil

(2012) David R. Singleton et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Development and validation of a citrate synthase directed quantitative PCR marker for soil bacterial communities

(2012) Hector F. Castro et al.   APPLIED SOIL ECOLOGY

Archaeal abundance in relation to root and fungal exudation rates

(2012) Anna E. Karlsson et al.   FEMS MICROBIOLOGY ECOLOGY

Bioremediation approaches for organic pollutants: A critical perspective

(2011) Mallavarapu Megharaj et al.   ENVIRONMENT INTERNATIONAL

Validation and Application of a PCR Primer Set to Quantify Fungal Communities in the Soil Environment by Real-Time Quantitative PCR

(2011) Nicolas Chemidlin Prévost-Bouré et al.   PLoS One

Analysis of 16S rRNA Amplicon Sequencing Options on the Roche/454 Next-Generation Titanium Sequencing Platform

(2011) Hideyuki Tamaki et al.   PLoS One

Bioaugmentation and biostimulation strategies to improve the effectiveness of bioremediation processes

(2010) Meenu Tyagi et al.   BIODEGRADATION

Bacterial community changes during bioremediation of aliphatic hydrocarbon-contaminated soil

(2010) Cécile Militon et al.   FEMS MICROBIOLOGY ECOLOGY

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Emerging high-throughput approaches to analyze bioremediation of sites contaminated with hazardous and/or recalcitrant wastes

(2008) Ben Stenuit et al.   BIOTECHNOLOGY ADVANCES