Comparative mitogenomics reveals large-scale gene rearrangements in the mitochondrial genome of two Pleurotus species

Mitochondrial adaptation in steatotic mice

(2018) Claudia Einer et al.   MITOCHONDRION

Characterization and phylogenetic analysis of complete mitochondrial genomes for two desert cyprinodontoid fishes, Empetrichthys latos and Crenichthys baileyi

(2017) Miguel Jimenez et al.   GENE

Characterization of the complete mitochondrial genome of Acanthoscelides obtectus (Coleoptera: Chrysomelidae: Bruchinae) with phylogenetic analysis

(2017) Jie Yao et al.   GENETICA

Characterization and immunomodulatory effects of glucans from Pleurotus albidus, a promising species of mushroom for farming and biomass production

(2017) Victor Costa Castro-Alves et al.   INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES

In Vitro Antioxidant and In Vivo Hypolipidemic Effects of the King Oyster Culinary-Medicinal Mushroom, Pleurotus eryngii var. ferulae DDL01 (Agaricomycetes), in Rats with High-Fat Diet–Induced Fatty Liver and Hyperlipidemia

(2017) Jun-Hui Choi et al.   INTERNATIONAL JOURNAL OF MEDICINAL MUSHROOMS

Complete sequence and characterization of the mitochondrial genome of Diphyllobothrium stemmacephalum , the type species of genus Diphyllobothrium (Cestoda: Diphyllobothriidae), using next generation sequencing

(2017) Hiroshi Yamasaki et al.   PARASITOLOGY INTERNATIONAL

Comparative Transcriptome Analysis Identified Candidate Genes Related to Bailinggu Mushroom Formation and Genetic Markers for Genetic Analyses and Breeding

(2017) Yongping Fu et al.   Scientific Reports

The mitochondrial genome of a sea anemone Bolocera sp. exhibits novel genetic structures potentially involved in adaptation to the deep-sea environment

(2017) Bo Zhang et al.   Ecology and Evolution

SMRT Sequencing Revealed Mitogenome Characteristics and Mitogenome-Wide DNA Modification Pattern in Ophiocordyceps sinensis

(2017) Xincong Kang et al.   Frontiers in Microbiology

Complete Mitochondrial Genome of Phytophthora nicotianae and Identification of Molecular Markers for the Oomycetes

(2017) Xiaolong Yuan et al.   Frontiers in Microbiology

Comparative mitogenomic analysis of mirid bugs (Hemiptera: Miridae) and evaluation of potential DNA barcoding markers

(2017) Juan Wang et al.   PeerJ

The complete mitochondrial genome of the widely cultivated edible fungus Lentinula edodes

(2017) Ruiheng Yang et al.   Mitochondrial DNA Part B-Resources

Hypolipidaemic and hypoglycaemic activities of polysaccharide from Pleurotus eryngii in Kunming mice

(2016) Li Chen et al.   INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES

tRNAscan-SE On-line: integrating search and context for analysis of transfer RNA genes

(2016) Todd M. Lowe et al.   NUCLEIC ACIDS RESEARCH

Novel trypanocide from an extract of Pleurotus sajor-caju against Trypanosoma congolense

(2016) Isaiah O. Ademola et al.   PHARMACEUTICAL BIOLOGY

Intron Derived Size Polymorphism in the Mitochondrial Genomes of Closely Related Chrysoporthe Species

(2016) Aquillah Mumo Kanzi et al.   PLoS One

The complete mitochondrial genome of the nematode endoparasitic fungusHirsutella minnesotensis

(2015) Yong-Jie Zhang et al.   Mitochondrial DNA

Complete mitochondrial genomes and nuclear ribosomal RNA operons of two species of Diplostomum (Platyhelminthes: Trematoda): a molecular resource for taxonomy and molecular epidemiology of important fish pathogens

(2015) Jan Brabec et al.   Parasites & Vectors

Characterization and Phylogenetic Analysis of the Mitochondrial Genome of Shiraia bambusicola Reveals Special Features in the Order of Pleosporales

(2015) Xiao-Ye Shen et al.   PLoS One

A novel model of double replications and random loss accounts for rearrangements in the Mitogenome of Samariscus latus (Teleostei: Pleuronectiformes)

(2014) Wei Shi et al.   BMC GENOMICS

Intronic and plasmid-derived regions contribute to the large mitochondrial genome sizes of Agaricomycetes

(2014) Kajsa Himmelstrand et al.   CURRENT GENETICS

Mobile elements and mitochondrial genome expansion in the soil fungus and potato pathogenRhizoctonia solaniAG-3

(2014) Liliana Losada et al.   FEMS MICROBIOLOGY LETTERS

High Variability of Mitochondrial Gene Order among Fungi

(2014) Gabriela Aguileta et al.   Genome Biology and Evolution

Widespread occurrence of organelle genome-encoded 5S rRNAs including permuted molecules

(2014) Matus Valach et al.   NUCLEIC ACIDS RESEARCH

Extensive sampling of basidiomycete genomes demonstrates inadequacy of the white-rot/brown-rot paradigm for wood decay fungi

(2014) Robert Riley et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The 135 kbp mitochondrial genome of Agaricus bisporus is the largest known eukaryotic reservoir of group I introns and plasmid-related sequences

(2013) Cyril Férandon et al.   FUNGAL GENETICS AND BIOLOGY

Reconstructing mitochondrial genomes directly from genomic next-generation sequencing reads—a baiting and iterative mapping approach

(2013) Christoph Hahn et al.   NUCLEIC ACIDS RESEARCH

Pfam: the protein families database

(2013) Robert D. Finn et al.   NUCLEIC ACIDS RESEARCH

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

(2012) Anton Bankevich et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

The mitochondrial genome of the white-rot fungus Flammulina velutipes

(2012) Hyeokjun Yoon et al.   JOURNAL OF GENERAL AND APPLIED MICROBIOLOGY

jModelTest 2: more models, new heuristics and parallel computing

(2012) Diego Darriba et al.   NATURE METHODS

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

(2012) Fredrik Ronquist et al.   SYSTEMATIC BIOLOGY

Alignment of multiple complete genomes suggests that gene rearrangements may contribute towards the speciation of Mycobacteria

(2011) J.C. Garcia-Betancur et al.   INFECTION GENETICS AND EVOLUTION

The Agaricus bisporus cox1 Gene: The Longest Mitochondrial Gene and the Largest Reservoir of Mitochondrial Group I Introns

(2010) Cyril Férandon et al.   PLoS One

Molecular Poltergeists: Mitochondrial DNA Copies (numts) in Sequenced Nuclear Genomes

(2010) Einat Hazkani-Covo et al.   PLoS Genetics

The mitochondrial genome of the Basidiomycete fungusPleurotus ostreatus(oyster mushroom)

(2008) Yong Wang et al.   FEMS MICROBIOLOGY LETTERS

The mitochondrial genome of the phytopathogenic basidiomycete Moniliophthora perniciosa is 109kb in size and contains a stable integrated plasmid

(2008) Eduardo F. Formighieri et al.