SMRT Sequencing Revealed Mitogenome Characteristics and Mitogenome-Wide DNA Modification Pattern in Ophiocordyceps sinensis
出版年份 2017 全文链接
标题
SMRT Sequencing Revealed Mitogenome Characteristics and Mitogenome-Wide DNA Modification Pattern in Ophiocordyceps sinensis
作者
关键词
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出版物
Frontiers in Microbiology
Volume 8, Issue -, Pages -
出版商
Frontiers Media SA
发表日期
2017-07-27
DOI
10.3389/fmicb.2017.01422
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- (2017) Dina Bellizzi Frontiers in Bioscience-Landmark
- Widespread adenine N6-methylation of active genes in fungi
- (2017) Stephen J Mondo et al. NATURE GENETICS
- Bisulfite oligonucleotide-capture sequencing for targeted base- and strand-specific absolute 5-methylcytosine quantitation
- (2016) Dustin R. Masser et al. AGE
- Localized Retroprocessing as a Model of Intron Loss in the Plant Mitochondrial Genome
- (2016) Argelia Cuenca et al. Genome Biology and Evolution
- Hydroxymethyl cytosine marks in the human mitochondrial genome are dynamic in nature
- (2016) Sourav Ghosh et al. MITOCHONDRION
- MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets
- (2016) Sudhir Kumar et al. MOLECULAR BIOLOGY AND EVOLUTION
- The complete mitochondrial genome of huperzine A-producing endophytic fungus Penicillium polonicum
- (2016) Xincong Kang et al. Mitochondrial DNA Part B-Resources
- Role of restriction-modification systems in prokaryotic evolution and ecology
- (2015) A. S. Ershova et al. BIOCHEMISTRY-MOSCOW
- Analysis of the complete mitochondrial genome of Pochonia chlamydosporia suggests a close relationship to the invertebrate-pathogenic fungi in Hypocreales
- (2015) Runmao Lin et al. BMC MICROBIOLOGY
- The mitochondrial side of epigenetics
- (2015) Alessandra Castegna et al. PHYSIOLOGICAL GENOMICS
- Mitochondrial epigenetics: an overlooked layer of regulation?
- (2015) Monique G.P. van der Wijst et al. TRENDS IN GENETICS
- Complete mitochondrial genome of the medicinal fungus Ophiocordyceps sinensis
- (2015) Yi Li et al. Scientific Reports
- Characterization and Phylogenetic Analysis of the Mitochondrial Genome of Shiraia bambusicola Reveals Special Features in the Order of Pleosporales
- (2015) Xiao-Ye Shen et al. PLoS One
- The Pivotal Regulatory Landscape of RNA Modifications
- (2014) Sheng Li et al. Annual Review of Genomics and Human Genetics
- Mobile elements and mitochondrial genome expansion in the soil fungus and potato pathogenRhizoctonia solaniAG-3
- (2014) Liliana Losada et al. FEMS MICROBIOLOGY LETTERS
- High Variability of Mitochondrial Gene Order among Fungi
- (2014) Gabriela Aguileta et al. Genome Biology and Evolution
- Comparative analysis of human mitochondrial methylomes shows distinct patterns of epigenetic regulation in mitochondria
- (2014) Sourav Ghosh et al. MITOCHONDRION
- Widespread occurrence of organelle genome-encoded 5S rRNAs including permuted molecules
- (2014) Matus Valach et al. NUCLEIC ACIDS RESEARCH
- Mitochondrial Genome of Phlebia radiata Is the Second Largest (156 kbp) among Fungi and Features Signs of Genome Flexibility and Recent Recombination Events
- (2014) Heikki Salavirta et al. PLoS One
- The 203 kbp Mitochondrial Genome of the Phytopathogenic Fungus Sclerotinia borealis Reveals Multiple Invasions of Introns and Genomic Duplications
- (2014) Andrey V. Mardanov et al. PLoS One
- Adaptability to hypobaric hypoxia is facilitated through mitochondrial bioenergetics: anin vivostudy
- (2013) Loganathan Chitra et al. BRITISH JOURNAL OF PHARMACOLOGY
- The Control Region of Mitochondrial DNA Shows an Unusual CpG and Non-CpG Methylation Pattern
- (2013) D. Bellizzi et al. DNA RESEARCH
- Next-generation technologies and data analytical approaches for epigenomics
- (2013) Klaas Mensaert et al. ENVIRONMENTAL AND MOLECULAR MUTAGENESIS
- Mitochondrial DNA response to high altitude: A new perspective on high-altitude adaptation
- (2013) Yongjun Luo et al. Mitochondrial DNA
- MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
- (2013) K. Katoh et al. MOLECULAR BIOLOGY AND EVOLUTION
- Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data
- (2013) Chen-Shan Chin et al. NATURE METHODS
- Detecting DNA Modifications from SMRT Sequencing Data by Modeling Sequence Context Dependence of Polymerase Kinetic
- (2013) Zhixing Feng et al. PLoS Computational Biology
- Reducing assembly complexity of microbial genomes with single-molecule sequencing
- (2013) Sergey Koren et al. GENOME BIOLOGY
- Mapping single molecule sequencing reads using basic local alignment with successive refinement (BLASR): application and theory
- (2012) Mark J Chaisson et al. BMC BIOINFORMATICS
- Sequencing of mitochondrial genomes of nine Aspergillus and Penicillium species identifies mobile introns and accessory genes as main sources of genome size variability
- (2012) Vinita Joardar et al. BMC GENOMICS
- Pacific biosciences sequencing technology for genotyping and variation discovery in human data
- (2012) Mauricio O Carneiro et al. BMC GENOMICS
- The genusCordyceps: a chemical and pharmacological review
- (2012) Kai Yue et al. JOURNAL OF PHARMACY AND PHARMACOLOGY
- Structural, functional and evolutionary relationships between homing endonucleases and proteins from their host organisms
- (2012) G. K. Taylor et al. NUCLEIC ACIDS RESEARCH
- Genomic epidemiology of the Escherichia coli O104:H4 outbreaks in Europe, 2011
- (2012) Y. H. Grad et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Mitochondrial Evolution
- (2012) M. W. Gray Cold Spring Harbor Perspectives in Biology
- A survey of the geographic distribution of Ophiocordyceps sinensis
- (2011) Yi Li et al. JOURNAL OF MICROBIOLOGY
- Mitogenomic analysis of Chinese snub-nosed monkeys: Evidence of positive selection in NADH dehydrogenase genes in high-altitude adaptation
- (2011) Li Yu et al. MITOCHONDRION
- Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega
- (2011) F. Sievers et al. Molecular Systems Biology
- Homing Endonucleases: From Microbial Genetic Invaders to Reagents for Targeted DNA Modification
- (2011) Barry L. Stoddard STRUCTURE
- Mitochondrial inheritance in fungi
- (2010) Christoph W Basse CURRENT OPINION IN MICROBIOLOGY
- The NIH Roadmap Epigenomics Mapping Consortium
- (2010) Bradley E Bernstein et al. NATURE BIOTECHNOLOGY
- Direct detection of DNA methylation during single-molecule, real-time sequencing
- (2010) Benjamin A Flusberg et al. NATURE METHODS
- Circos: An information aesthetic for comparative genomics
- (2009) M. Krzywinski et al. GENOME RESEARCH
- Molecular Evolution of the mtDNA Encoded rps3 Gene Among Filamentous Ascomycetes Fungi with an Emphasis on the Ophiostomatoid Fungi
- (2009) Jyothi Sethuraman et al. JOURNAL OF MOLECULAR EVOLUTION
- The fatal fungal outbreak on Vancouver Island is characterized by enhanced intracellular parasitism driven by mitochondrial regulation
- (2009) H. Ma et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- PKCδ-dependent functional switch of rpS3 between translation and DNA repair
- (2008) Tae-Sung Kim et al. BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH
- Real-Time DNA Sequencing from Single Polymerase Molecules
- (2008) J. Eid et al. SCIENCE
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