Community composition, diversity, and metabolism of intestinal microbiota in cultivated European eel (Anguilla anguilla)

Introducing EzBioCloud: a taxonomically united database of 16S rRNA gene sequences and whole-genome assemblies

(2017)   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Composition of Gut Microbiota in the Gibel Carp (Carassius auratus gibelio) Varies with Host Development

(2017) Xinghao Li et al.   MICROBIAL ECOLOGY

Progress in fish gastrointestinal microbiota research

(2017) An R. Wang et al.   Reviews in Aquaculture

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

(2016) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

The gut microbiome and degradation enzyme activity of wild freshwater fishes influenced by their trophic levels

(2016) Han Liu et al.   Scientific Reports

Molecular, Biochemical, and Dietary Regulation Features of α-Amylase in a Carnivorous Crustacean, the Spiny Lobster Panulirus argus

(2016) Leandro Rodríguez-Viera et al.   PLoS One

A high-resolution map of the gut microbiota in Atlantic salmon (Salmo salar): A basis for comparative gut microbial research

(2016) Karina Gajardo et al.   Scientific Reports

Expression of Paenibacillus polymyxa β-1,3-1,4-glucanase in Streptomyces lydicus A01 improves its biocontrol effect against Botrytis cinerea

(2015) Jinjin Li et al.   BIOLOGICAL CONTROL

Multiple analyses of microbial communities applied to the gut of the wood-feeding termite Reticulitermes flavipes fed on artificial diets

(2015) Cédric Tarayre et al.   SYMBIOSIS

Important impacts of intestinal bacteria on utilization of dietary amino acids in pigs

(2014) Yu-Xiang Yang et al.   AMINO ACIDS

The development of the gut microbiota in rainbow trout (Oncorhynchus mykiss) is affected by first feeding and diet type

(2014) H.-C. Ingerslev et al.   AQUACULTURE

Individuals' diet diversity influences gut microbial diversity in two freshwater fish (threespine stickleback and Eurasian perch)

(2014) Daniel I. Bolnick et al.   ECOLOGY LETTERS

Characterization of the gut microbiota of three commercially valuable warmwater fish species

(2014) A.M. Larsen et al.   JOURNAL OF APPLIED MICROBIOLOGY

Intestinal microbiota in fishes: what's known and what's not

(2014) Kendall D. Clements et al.   MOLECULAR ECOLOGY

The room temperature preservation of filtered environmental DNA samples and assimilation into a phenol-chloroform-isoamyl alcohol DNA extraction

(2014) Mark A. Renshaw et al.   Molecular Ecology Resources

You are what you eat

(2014) Harald Brüssow et al.   NATURE BIOTECHNOLOGY

Recovery of the Gut Microbiome following Fecal Microbiota Transplantation

(2014) A. M. Seekatz et al.   mBio

Aquacultured Rainbow Trout (Oncorhynchus mykiss) Possess a Large Core Intestinal Microbiota That Is Resistant to Variation in Diet and Rearing Density

(2013) S. Wong et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Adenomatous Polyps Are Driven by Microbe-Instigated Focal Inflammation and Are Controlled by IL-10-Producing T Cells

(2013) K. L. Dennis et al.   CANCER RESEARCH

Factors influencing the grass carp gut microbiome and its effect on metabolism

(2013) Jiajia Ni et al.   FEMS MICROBIOLOGY ECOLOGY

Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences

(2013) Morgan G I Langille et al.   NATURE BIOTECHNOLOGY

Enzyme-producing bacteria isolated from fish gut: a review

(2012) A.K. Ray et al.   AQUACULTURE NUTRITION

Intestinal microbiota composition in fishes is influenced by host ecology and environment

(2012) SANDI WONG et al.   MOLECULAR ECOLOGY

The role of the gut microbiota in nutrition and health

(2012) Harry J. Flint et al.   Nature Reviews Gastroenterology & Hepatology

Composition, Diversity, and Origin of the Bacterial Community in Grass Carp Intestine

(2012) Shangong Wu et al.   PLoS One

Long-Term Exposure to Antibiotics Has Caused Accumulation of Resistance Determinants in the Gut Microbiota of Honeybees

(2012) B. Tian et al.   mBio

Quality control and preprocessing of metagenomic datasets

(2011) R. Schmieder et al.   BIOINFORMATICS

FLASH: fast length adjustment of short reads to improve genome assemblies

(2011) T. Magoc et al.   BIOINFORMATICS

Evidence for a core gut microbiota in the zebrafish

(2011) Guus Roeselers et al.   ISME Journal

Dietary Carbohydrate Utilization by European Sea Bass (Dicentrarchus labraxL.) and Gilthead Sea Bream (Sparus aurataL.) Juveniles

(2011) P. Enes et al.   REVIEWS IN FISHERIES SCIENCE

Analysis of the bacterial community in a laboratory-scale nitrification reactor and a wastewater treatment plant by 454-pyrosequencing

(2011) Lin Ye et al.   WATER RESEARCH

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Individuality in gut microbiota composition is a complex polygenic trait shaped by multiple environmental and host genetic factors

(2010) A. K. Benson et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Nutritional ecology of marine herbivorous fishes: ten years on

(2009) Kendall D. Clements et al.   FUNCTIONAL ECOLOGY

Distribution of enzyme-producing bacteria in the digestive tracts of some freshwater fish

(2008) Sabyasachi Mondal et al.   ACTA ICHTHYOLOGICA ET PISCATORIA

Evaluation of Protease-producing Ability of Fish Gut Isolate Bacillus cereus for Aqua Feed

(2008) P. Esakkiraj et al.   Food and Bioprocess Technology