标题
Frequency-dependent selection in vaccine-associated pneumococcal population dynamics
作者
关键词
-
出版物
Nature Ecology & Evolution
Volume 1, Issue 12, Pages 1950-1960
出版商
Springer Nature
发表日期
2017-10-13
DOI
10.1038/s41559-017-0337-x
参考文献
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- Evolution of antibiotic resistance is linked to any genetic mechanism affecting bacterial duration of carriage
- (2017) Sonja Lehtinen et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Diverse evolutionary patterns of pneumococcal antigens identified by pangenome-wide immunological screening
- (2017) Nicholas J. Croucher et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Diverse Ecological Strategies Are Encoded byStreptococcus pneumoniaeBacteriocin-Like Peptides
- (2016) Eric L. Miller et al. Genome Biology and Evolution
- Penicillin-Binding Protein Transpeptidase Signatures for Tracking and Predicting β-Lactam Resistance Levels in Streptococcus pneumoniae
- (2016) Yuan Li et al. mBio
- Characterization of a Multipeptide Lantibiotic Locus in Streptococcus pneumoniae
- (2016) Natalie Maricic et al. mBio
- Horizontal DNA Transfer Mechanisms of Bacteria as Weapons of Intragenomic Conflict
- (2016) Nicholas J. Croucher et al. PLOS BIOLOGY
- Gene-specific selective sweeps in bacteria and archaea caused by negative frequency-dependent selection
- (2015) Nobuto Takeuchi et al. BMC BIOLOGY
- Genomic analyses of pneumococci reveal a wide diversity of bacteriocins – including pneumocyclicin, a novel circular bacteriocin
- (2015) Carlijn Bogaardt et al. BMC GENOMICS
- A new quorum-sensing system (TprA/PhrA) forStreptococcus pneumoniae D39 that regulates a lantibiotic biosynthesis gene cluster
- (2015) Sharon E. Hoover et al. MOLECULAR MICROBIOLOGY
- Five winters of pneumococcal serotype replacement in UK carriage following PCV introduction
- (2015) Rebecca A. Gladstone et al. VACCINE
- Selective and Genetic Constraints on Pneumococcal Serotype Switching
- (2015) Nicholas J. Croucher et al. PLoS Genetics
- Vaccination Drives Changes in Metabolic and Virulence Profiles of Streptococcus pneumoniae
- (2015) Eleanor R. Watkins et al. PLoS Pathogens
- How competition governs whether moderate or aggressive treatment minimizes antibiotic resistance
- (2015) Caroline Colijn et al. eLife
- Population genomic datasets describing the post-vaccine evolutionary epidemiology of Streptococcus pneumoniae
- (2015) Nicholas J. Croucher et al. Scientific Data
- Dense genomic sampling identifies highways of pneumococcal recombination
- (2014) Claire Chewapreecha et al. NATURE GENETICS
- Explaining microbial genomic diversity in light of evolutionary ecology
- (2014) Otto X. Cordero et al. NATURE REVIEWS MICROBIOLOGY
- Diversification of bacterial genome content through distinct mechanisms over different timescales
- (2014) Nicholas J. Croucher et al. Nature Communications
- Gene Frequency Distributions Reject a Neutral Model of Genome Evolution
- (2013) Alexander E. Lobkovsky et al. Genome Biology and Evolution
- Within-Host Selection Is Limited by an Effective Population of Streptococcus pneumoniae during Nasopharyngeal Colonization
- (2013) Yuan Li et al. INFECTION AND IMMUNITY
- Hierarchical and Spatially Explicit Clustering of DNA Sequences with BAPS Software
- (2013) L. Cheng et al. MOLECULAR BIOLOGY AND EVOLUTION
- MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
- (2013) K. Katoh et al. MOLECULAR BIOLOGY AND EVOLUTION
- Population genomics of post-vaccine changes in pneumococcal epidemiology
- (2013) Nicholas J Croucher et al. NATURE GENETICS
- A neutral theory of genome evolution and the frequency distribution of genes
- (2012) Bart Haegeman et al. BMC GENOMICS
- Estimating Rates of Carriage Acquisition and Clearance and Competitive Ability for Pneumococcal Serotypes in Kenya With a Markov Transition Model
- (2012) Marc Lipsitch et al. EPIDEMIOLOGY
- Dynamics of Neutral and Selected Alleles When the Offspring Distribution Is Skewed
- (2012) R. Der et al. GENETICS
- The Infinitely Many Genes Model for the Distributed Genome of Bacteria
- (2012) Franz Baumdicker et al. Genome Biology and Evolution
- Testing the Infinitely Many Genes Model for the Evolution of the Bacterial Core Genome and Pangenome
- (2012) R. Eric Collins et al. MOLECULAR BIOLOGY AND EVOLUTION
- Niche and Neutral Effects of Acquired Immunity Permit Coexistence of Pneumococcal Serotypes
- (2012) S. Cobey et al. SCIENCE
- Population Genomics of Early Events in the Ecological Differentiation of Bacteria
- (2012) B. J. Shapiro et al. SCIENCE
- The variant call format and VCFtools
- (2011) P. Danecek et al. BIOINFORMATICS
- Identification, variation and transcription of pneumococcal repeat sequences
- (2011) Nicholas J Croucher et al. BMC GENOMICS
- Rapid Pneumococcal Evolution in Response to Clinical Interventions
- (2011) N. J. Croucher et al. SCIENCE
- Accelerated Profile HMM Searches
- (2011) Sean R. Eddy PLoS Computational Biology
- A low-polynomial algorithm for assembling clusters of orthologous groups from intergenomic symmetric best matches
- (2010) David M. Kristensen et al. BIOINFORMATICS
- Prodigal: prokaryotic gene recognition and translation initiation site identification
- (2010) Doug Hyatt et al. BMC BIOINFORMATICS
- Re-emergence of the type 1 pilus among Streptococcus pneumoniae isolates in Massachusetts, USA
- (2010) Gili Regev-Yochay et al. VACCINE
- Fast and accurate short read alignment with Burrows-Wheeler transform
- (2009) H. Li et al. BIOINFORMATICS
- BLAST+: architecture and applications
- (2009) Christiam Camacho et al. BMC BIOINFORMATICS
- Continued Impact of Pneumococcal Conjugate Vaccine on Carriage in Young Children
- (2009) S. S. Huang et al. PEDIATRICS
- Estimation of vaccine efficacy against acquisition of pneumococcal carriage
- (2009) Hanna Rinta-Kokko et al. VACCINE
- Uptake of Pneumococcal Conjugate Vaccine Among Children in the 1998–2002 United States Birth Cohorts
- (2008) J. Pekka Nuorti et al. AMERICAN JOURNAL OF PREVENTIVE MEDICINE
- Artemis and ACT: viewing, annotating and comparing sequences stored in a relational database
- (2008) Tim Carver et al. BIOINFORMATICS
- Velvet: Algorithms for de novo short read assembly using de Bruijn graphs
- (2008) D. R. Zerbino et al. GENOME RESEARCH
- A Second Pilus Type in Streptococcus pneumoniae Is Prevalent in Emerging Serotypes and Mediates Adhesion to Host Cells
- (2008) F. Bagnoli et al. JOURNAL OF BACTERIOLOGY
- Role of Conjugative Elements in the Evolution of the Multidrug-Resistant Pandemic Clone Streptococcus pneumoniaeSpain23F ST81
- (2008) N. J. Croucher et al. JOURNAL OF BACTERIOLOGY
- The rise and fall of bacterial clones: Streptococcus pneumoniae
- (2008) Birgitta Henriques-Normark et al. NATURE REVIEWS MICROBIOLOGY
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