Horizontally acquired AT-rich genes in Escherichia coli cause toxicity by sequestering RNA polymerase

Xenogeneic Silencing and Its Impact on Bacterial Genomes

(2016) Kamna Singh et al.   Annual Review of Microbiology

H-NS Regulates Gene Expression and Compacts the Nucleoid: Insights from Single-Molecule Experiments

(2015) Ricksen S. Winardhi et al.   BIOPHYSICAL JOURNAL

H-NS and RNA polymerase: a love–hate relationship?

(2015) Robert Landick et al.   CURRENT OPINION IN MICROBIOLOGY

Horizontal gene transfer: building the web of life

(2015) Shannon M. Soucy et al.   NATURE REVIEWS GENETICS

Live-cell superresolution microscopy reveals the organization of RNA polymerase in the bacterial nucleoid

(2015) Mathew Stracy et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Localization and Action of Topoisomerase IV in Escherichia coli Chromosome Segregation Is Coordinated by the SMC Complex, MukBEF

(2015) Pawel Zawadzki et al.   Cell Reports

The Molecular Basis for Control of ETEC Enterotoxin Expression in Response to Environment and Host

(2015) James R. J. Haycocks et al.   PLoS Pathogens

Bridged filaments of histone-like nucleoid structuring protein pause RNA polymerase and aid termination in bacteria

(2015) Matthew V Kotlajich et al.   eLife

Strong spurious transcription likely contributes to DNA insert bias in typical metagenomic clone libraries

(2015) Kathy N. Lam et al.   Microbiome

Widespread suppression of intragenic transcription initiation by H-NS

(2014) S. S. Singh et al.   GENES & DEVELOPMENT

The multifork Escherichia coli chromosome is a self-duplicating and self-segregating thermodynamic ring polymer

(2014) B. Youngren et al.   GENES & DEVELOPMENT

The genome-scale interplay amongst xenogene silencing, stress response and chromosome architecture in Escherichia coli

(2014) Rajalakshmi Srinivasan et al.   NUCLEIC ACIDS RESEARCH

H-NS-like nucleoid-associated proteins, mobile genetic elements and horizontal gene transfer in bacteria

(2014) Charles J. Dorman   PLASMID

Silencing by H-NS Potentiated the Evolution of Salmonella

(2014) Sabrina S. Ali et al.   PLoS Pathogens

Multiscale Spatial Organization of RNA Polymerase in Escherichia coli

(2013) Ulrike Endesfelder et al.   BIOPHYSICAL JOURNAL

Genome-Scale Analyses of Escherichia coli and Salmonella enterica AraC Reveal Noncanonical Targets and an Expanded Core Regulon

(2013) A. M. Stringer et al.   JOURNAL OF BACTERIOLOGY

Gene silencing and large-scale domain structure of the E. coli genome

(2013) Mina Zarei et al.   Molecular BioSystems

Polymer modeling of the E. coli genome reveals the involvement of locus positioning and macrodomain structuring for the control of chromosome conformation and segregation

(2013) Ivan Junier et al.   NUCLEIC ACIDS RESEARCH

Exploring the costs of horizontal gene transfer

(2013) David A. Baltrus   TRENDS IN ECOLOGY & EVOLUTION

E. coli Fis Protein Insulates the cbpA Gene from Uncontrolled Transcription

(2013) Kiran Chintakayala et al.   PLoS Genetics

H-NS Can Facilitate Specific DNA-binding by RNA Polymerase in AT-rich Gene Regulatory Regions

(2013) Shivani S. Singh et al.   PLoS Genetics

Activating Transcription in Bacteria

(2012) David J. Lee et al.   Annual Review of Microbiology

Revisiting Global Gene Expression Analysis

(2012) Jakob Lovén et al.   CELL

EcoCyc: fusing model organism databases with systems biology

(2012) Ingrid M. Keseler et al.   NUCLEIC ACIDS RESEARCH

High-Density Transcriptional Initiation Signals Underline Genomic Islands in Bacteria

(2012) Qianli Huang et al.   PLoS One

A selective force favoring increased G+C content in bacterial genes

(2012) R. Raghavan et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Trends and barriers to lateral gene transfer in prokaryotes

(2011) Ovidiu Popa et al.   CURRENT OPINION IN MICROBIOLOGY

Directed networks reveal genomic barriers and DNA repair bypasses to lateral gene transfer among prokaryotes

(2011) O. Popa et al.   GENOME RESEARCH

Structural basis for recognition of AT-rich DNA by unrelated xenogeneic silencing proteins

(2011) B. R. G. Gordon et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Chromosomal Macrodomains and Associated Proteins: Implications for DNA Organization and Replication in Gram Negative Bacteria

(2011) Remus T. Dame et al.   PLoS Genetics

A divalent switch drives H-NS/DNA-binding conformations between stiffening and bridging modes

(2010) Y. Liu et al.   GENES & DEVELOPMENT

Direct and indirect effects of H-NS and Fis on global gene expression control in Escherichia coli

(2010) Christina Kahramanoglou et al.   NUCLEIC ACIDS RESEARCH

H-NS forms a superhelical protein scaffold for DNA condensation

(2010) S. T. Arold et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Lsr2 is a nucleoid-associated protein that targets AT-rich sequences and virulence genes in Mycobacterium tuberculosis

(2010) B. R. G. Gordon et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Transcriptional Regulator Rok Binds A+T-Rich DNA and Is Involved in Repression of a Mobile Genetic Element in Bacillus subtilis

(2010) Wiep Klaas Smits et al.   PLoS Genetics

Gene doctoring: a method for recombineering in laboratory and pathogenic Escherichia coli strains

(2009) David J Lee et al.   BMC MICROBIOLOGY

The Multifaceted Proteins MvaT and MvaU, Members of the H-NS Family, Control Arginine Metabolism, Pyocyanin Synthesis, and Prophage Activation in Pseudomonas aeruginosa PAO1

(2009) C. Li et al.   JOURNAL OF BACTERIOLOGY

A global view of Escherichia coli Rsd protein and its interactions

(2009) Sarah E. Piper et al.   Molecular BioSystems

Selective repression by Fis and H-NS at theEscherichia coli dpspromoter

(2008) David C. Grainger et al.   MOLECULAR MICROBIOLOGY

H-NS family members function coordinately in an opportunistic pathogen

(2008) S. Castang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA