The York Gospels: a 1000-year biological palimpsest

Comparison of methods for identification of microbial communities in book collections: Culture-dependent (sequencing and MALDI-TOF MS) and culture-independent (Illumina MiSeq)

(2018) Lucia Kraková et al.   INTERNATIONAL BIODETERIORATION & BIODEGRADATION

A new model for ancient DNA decay based on paleogenomic meta-analysis

(2017) Logan Kistler et al.   NUCLEIC ACIDS RESEARCH

DNA damage is a pervasive cause of sequencing errors, directly confounding variant identification

(2017) Lixin Chen et al.   SCIENCE

Ancient genomic changes associated with domestication of the horse

(2017) Pablo Librado et al.   SCIENCE

Evaluation of a Parchment Document, the 13th Century Incorporation Charter for the City of Krakow, Poland, for Microbial Hazards

(2016) Tomasz Lech   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Ancient DNA in historical parchments - identifying a procedure for extraction and amplification of genetic material

(2016) T. Lech   GENETICS AND MOLECULAR RESEARCH

Skin Microbiome Surveys Are Strongly Influenced by Experimental Design

(2016) Jacquelyn S. Meisel et al.   JOURNAL OF INVESTIGATIVE DERMATOLOGY

Fast, Accurate and Automatic Ancient Nucleosome and Methylation Maps with epiPALEOMIX

(2016) Kristian Hanghøj et al.   MOLECULAR BIOLOGY AND EVOLUTION

metaBIT, an integrative and automated metagenomic pipeline for analysing microbial profiles from high-throughput sequencing shotgun data

(2016) Guillaume Louvel et al.   Molecular Ecology Resources

Epigenetics: It's Getting Old. Past Meets Future in Paleoepigenetics

(2016) David Gokhman et al.   TRENDS IN ECOLOGY & EVOLUTION

Microbial Community Patterns Associated with Automated Teller Machine Keypads in New York City

(2016) Holly M. Bik et al.   mSphere

What Have We Learned about the Microbiomes of Indoor Environments?: TABLE 1 

(2016) Brent Stephens   mSystems

Improved Ancestry Estimation for both Genotyping and Sequencing Data using Projection Procrustes Analysis and Genotype Imputation

(2015) Chaolong Wang et al.   AMERICAN JOURNAL OF HUMAN GENETICS

WIDDE: a Web-Interfaced next generation database for genetic diversity exploration, with a first application in cattle

(2015) Guilhem Sempéré et al.   BMC GENOMICS

Ancient Wolf Genome Reveals an Early Divergence of Domestic Dog Ancestors and Admixture into High-Latitude Breeds

(2015) Pontus Skoglund et al.   CURRENT BIOLOGY

Museums: The endangered dead

(2015) Christopher Kemp   NATURE

Reconstructing ancient genomes and epigenomes

(2015) Ludovic Orlando et al.   NATURE REVIEWS GENETICS

Animal origin of 13th-century uterine vellum revealed using noninvasive peptide fingerprinting

(2015) Sarah Fiddyment et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Intrinsic challenges in ancient microbiome reconstruction using 16S rRNA gene amplification

(2015) Kirsten A. Ziesemer et al.   Scientific Reports

Microbiota of the indoor environment: a meta-analysis

(2015) Rachel I. Adams et al.   Microbiome

STAMP: statistical analysis of taxonomic and functional profiles

(2014) Donovan H. Parks et al.   BIOINFORMATICS

Reagent and laboratory contamination can critically impact sequence-based microbiome analyses

(2014) Susannah J Salter et al.   BMC BIOLOGY

Unmasking the measles-like parchment discoloration: molecular and microanalytical approach

(2014) Guadalupe Piñar et al.   ENVIRONMENTAL MICROBIOLOGY

Paging through history: parchment as a reservoir of ancient DNA for next generation sequencing

(2014) M. D. Teasdale et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Common Contaminants in Next-Generation Sequencing That Hinder Discovery of Low-Abundance Microbes

(2014) Martin Laurence et al.   PLoS One

Genome flux and stasis in a five millennium transect of European prehistory

(2014) Cristina Gamba et al.   Nature Communications

Phenotypes from ancient DNA: Approaches, insights and prospects

(2013) Gloria G. Fortes et al.   BIOESSAYS

mapDamage2.0: fast approximate Bayesian estimates of ancient DNA damage parameters

(2013) Hákon Jónsson et al.   BIOINFORMATICS

Genome-wide nucleosome map and cytosine methylation levels of an ancient human genome

(2013) J. S. Pedersen et al.   GENOME RESEARCH

Thinking strings: Additional evidence for personal ornament use in the Middle Stone Age at Blombos Cave, South Africa

(2013) Marian Vanhaeren et al.   JOURNAL OF HUMAN EVOLUTION

Unlocking the vault: next-generation museum population genomics

(2013) Ke Bi et al.   MOLECULAR ECOLOGY

A novel method for integrated age and sex determination from archaeological cattle mandibles

(2012) S. McGrory et al.   JOURNAL OF ARCHAEOLOGICAL SCIENCE

8500-year-old Late Mesolithic garment embroidery from Vlasac (Serbia): Technological, use-wear and residue analyses

(2012) Emanuela Cristiani et al.   JOURNAL OF ARCHAEOLOGICAL SCIENCE

One Hundred Twenty Years of Koala Retrovirus Evolution Determined from Museum Skins

(2012) M. C. Avila-Arcos et al.   MOLECULAR BIOLOGY AND EVOLUTION

The revenge of time: fungal deterioration of cultural heritage with particular reference to books, paper and parchment

(2011) Katja Sterflinger et al.   ENVIRONMENTAL MICROBIOLOGY

The skin microbiome

(2011) Elizabeth A. Grice et al.   NATURE REVIEWS MICROBIOLOGY

Critical review of the MNI (minimum number of individuals) as a zooarchaeological unit of quantification

(2011) Manuel Domínguez-Rodrigo   Archaeological and Anthropological Sciences

A flock of sheep, goats and cattle: ancient DNA analysis reveals complexities of historical parchment manufacture

(2010) Michael G. Campana et al.   JOURNAL OF ARCHAEOLOGICAL SCIENCE

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Worldwide Human Relationships Inferred from Genome-Wide Patterns of Variation

(2008) J. Z. Li et al.   SCIENCE