标题
Metagenomic characterization of ambulances across the USA
作者
关键词
Ambulance, Classification, Taxonomy, Pre-hospital setting, Hospital-acquired infections, Nosocomial pathogens, Antimicrobial resistance, Microbial ecology, Metagenomics, Whole-genome sequencing
出版物
Microbiome
Volume 5, Issue 1, Pages -
出版商
Springer Nature
发表日期
2017-09-22
DOI
10.1186/s40168-017-0339-6
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Bacterial colonization and succession in a newly opened hospital
- (2017) Simon Lax et al. Science Translational Medicine
- High diversity of airborne fungi in the hospital environment as revealed by meta-sequencing-based microbiome analysis
- (2017) Xunliang Tong et al. Scientific Reports
- Higher classification sensitivity of short metagenomic reads with CLARK- S
- (2016) Rachid Ounit et al. BIOINFORMATICS
- Ecogenomics and potential biogeochemical impacts of globally abundant ocean viruses
- (2016) Simon Roux et al. NATURE
- CARD 2017: expansion and model-centric curation of the comprehensive antibiotic resistance database
- (2016) Baofeng Jia et al. NUCLEIC ACIDS RESEARCH
- Receipt of Antibiotics in Hospitalized Patients and Risk for Clostridium difficile Infection in Subsequent Patients Who Occupy the Same Bed
- (2016) Daniel E. Freedberg et al. JAMA Internal Medicine
- An evaluation of the accuracy and speed of metagenome analysis tools
- (2016) Stinus Lindgreen et al. Scientific Reports
- CLARK: fast and accurate classification of metagenomic and genomic sequences using discriminative k-mers
- (2015) Rachid Ounit et al. BMC GENOMICS
- Prevalence of nosocomial pathogens in German ambulances: the SEKURE study
- (2015) M Wepler et al. EMERGENCY MEDICINE JOURNAL
- Analysis of a long-term outbreak of XDRPseudomonas aeruginosa: a molecular epidemiological study
- (2015) Matthias Willmann et al. JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
- Potential NICU Environmental Influences on the Neonateʼs Microbiome
- (2015) Lacey E. Hartz et al. Advances in Neonatal Care
- Lack of Evidence for Plague or Anthrax on the New York City Subway
- (2015) Joel Ackelsberg et al. Cell Systems
- Geospatial Resolution of Human and Bacterial Diversity with City-Scale Metagenomics
- (2015) Ebrahim Afshinnekoo et al. Cell Systems
- Interpreting the replacement and richness difference components of beta diversity
- (2014) Pierre Legendre GLOBAL ECOLOGY AND BIOGEOGRAPHY
- Multistate Point-Prevalence Survey of Health Care–Associated Infections
- (2014) Shelley S. Magill et al. NEW ENGLAND JOURNAL OF MEDICINE
- Longitudinal analysis of microbial interaction between humans and the indoor environment
- (2014) S. Lax et al. SCIENCE
- Waste Not, Want Not: Why Rarefying Microbiome Data Is Inadmissible
- (2014) Paul J. McMurdie et al. PLoS Computational Biology
- The role of the surface environment in healthcare-associated infections
- (2013) David J. Weber et al. CURRENT OPINION IN INFECTIOUS DISEASES
- Microbial Diversity and Structure Are Drivers of the Biological Barrier Effect against Listeria monocytogenes in Soil
- (2013) Anne-Laure Vivant et al. PLoS One
- Patterns in the Composition of Microbial Communities from a Subtropical River: Effects of Environmental, Spatial and Temporal Factors
- (2013) Lemian Liu et al. PLoS One
- The Hospital Microbiome Project: Meeting Report for the 1st Hospital Microbiome Project Workshop on sampling design and building science measurements, Chicago, USA, June 7th-8th 2012
- (2013) Daniel Smith et al. Standards in Genomic Sciences
- Studying the microbiology of the indoor environment
- (2013) Scott T Kelley et al. GENOME BIOLOGY
- Detection and analysis of Staphylococcus aureus isolates found in ambulances in the Chicago metropolitan area
- (2012) James V. Rago et al. AMERICAN JOURNAL OF INFECTION CONTROL
- Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration
- (2012) H. Thorvaldsdottir et al. BRIEFINGS IN BIOINFORMATICS
- Metagenomic microbial community profiling using unique clade-specific marker genes
- (2012) Nicola Segata et al. NATURE METHODS
- Antibiotic Resistance Is Prevalent in an Isolated Cave Microbiome
- (2012) Kirandeep Bhullar et al. PLoS One
- ART: a next-generation sequencing read simulator
- (2011) Weichun Huang et al. BIOINFORMATICS
- The Role Played by Contaminated Surfaces in the Transmission of Nosocomial Pathogens
- (2011) Jonathan A. Otter et al. INFECTION CONTROL AND HOSPITAL EPIDEMIOLOGY
- Haemophilus influenzae Infections in the H. influenzae Type b Conjugate Vaccine Era
- (2011) Aarti Agrawal et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Fast and accurate long-read alignment with Burrows–Wheeler transform
- (2010) Heng Li et al. BIOINFORMATICS
- BEDTools: a flexible suite of utilities for comparing genomic features
- (2010) Aaron R. Quinlan et al. BIOINFORMATICS
- Community-Associated Methicillin-Resistant Staphylococcus aureus: Epidemiology and Clinical Consequences of an Emerging Epidemic
- (2010) M. Z. David et al. CLINICAL MICROBIOLOGY REVIEWS
- Risk Stratification-based Surveillance of Bacterial Contamination in Metropolitan Ambulances
- (2010) Hyun Noh et al. JOURNAL OF KOREAN MEDICAL SCIENCE
- Prevalence of Methicillin-ResistantStaphylococcus Aureusin Ambulances in Southern Maine
- (2010) Robert Brown et al. Prehospital Emergency Care
- Bacterial Pathogens in Ambulances: Results of Unannounced Sample Collection
- (2008) Donald W. Alves et al. Prehospital Emergency Care
- A latitudinal diversity gradient in planktonic marine bacteria
- (2008) J. A. Fuhrman et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
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