Environmental drivers of viral community composition in Antarctic soils identified by viromics
出版年份 2017 全文链接
标题
Environmental drivers of viral community composition in Antarctic soils identified by viromics
作者
关键词
Viromics, Soil, Antarctica, Viral diversity, Viral community structure
出版物
Microbiome
Volume 5, Issue 1, Pages -
出版商
Springer Nature
发表日期
2017-07-19
DOI
10.1186/s40168-017-0301-7
参考文献
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- Nearing the cold-arid limits of microbial life in permafrost of an upper dry valley, Antarctica
- (2016) Jacqueline Goordial et al. ISME Journal
- Antarctic eukaryotic soil diversity of the Prince Charles Mountains revealed by high-throughput sequencing
- (2016) Paul Czechowski et al. SOIL BIOLOGY & BIOCHEMISTRY
- Diversity and Ecology of Viruses in Hyperarid Desert Soils
- (2015) Olivier Zablocki et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Ecology and biogeochemistry of cyanobacteria in soils, permafrost, aquatic and cryptic polar habitats
- (2015) Thulani P. Makhalanyane et al. BIODIVERSITY AND CONSERVATION
- A multitrophic model to quantify the effects of marine viruses on microbial food webs and ecosystem processes
- (2015) Joshua S Weitz et al. ISME Journal
- Genetic signatures indicate widespread antibiotic resistance and phage infection in microbial communities of the McMurdo Dry Valleys, East Antarctica
- (2015) Sean T. S. Wei et al. POLAR BIOLOGY
- Viral dark matter and virus–host interactions resolved from publicly available microbial genomes
- (2015) Simon Roux et al. eLife
- Analysis of virus genomes from glacial environments reveals novel virus groups with unusual host interactions
- (2015) Christopher M. Bellas et al. Frontiers in Microbiology
- Biodiversity and distribution of polar freshwater DNA viruses
- (2015) D. Aguirre de Carcer et al. Science Advances
- High Individuality of Respiratory Bacterial Communities in a Large Cohort of Adult Cystic Fibrosis Patients under Continuous Antibiotic Treatment
- (2015) Rolf Kramer et al. PLoS One
- Soil Microbial Responses to Increased Moisture and Organic Resources along a Salinity Gradient in a Polar Desert
- (2014) David J. Van Horn et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Metavir 2: new tools for viral metagenome comparison and assembled virome analysis
- (2014) Simon Roux et al. BMC BIOINFORMATICS
- The spatial structure of Antarctic biodiversity
- (2014) Peter Convey et al. ECOLOGICAL MONOGRAPHS
- Fast and sensitive protein alignment using DIAMOND
- (2014) Benjamin Buchfink et al. NATURE METHODS
- Generating viral metagenomes from the coral holobiont
- (2014) Karen D. Weynberg et al. Frontiers in Microbiology
- Caught in the middle with multiple displacement amplification: the myth of pooling for avoiding multiple displacement amplification bias in a metagenome
- (2014) Rachel Marine et al. Microbiome
- Direct Assessment of Viral Diversity in Soils by Random PCR Amplification of Polymorphic DNA
- (2013) Sharath Srinivasiah et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Single-cell and population level viral infection dynamics revealed by phageFISH, a method to visualize intracellular and free viruses
- (2013) Elke Allers et al. ENVIRONMENTAL MICROBIOLOGY
- Reference-independent comparative metagenomics using cross-assembly: crAss
- (2012) Bas E. Dutilh et al. BIOINFORMATICS
- Abiotic factors influence microbial diversity in permanently cold soil horizons of a maritime-associated Antarctic Dry Valley
- (2012) Francesca Stomeo et al. FEMS MICROBIOLOGY ECOLOGY
- Marine Viruses: Truth or Dare
- (2011) Mya Breitbart Annual Review of Marine Science
- Amplification Methods Bias Metagenomic Libraries of Uncultured Single-Stranded and Double-Stranded DNA Viruses
- (2011) Kyoung-Ho Kim et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Metavir: a web server dedicated to virome analysis
- (2011) Simon Roux et al. BIOINFORMATICS
- Quality control and preprocessing of metagenomic datasets
- (2011) R. Schmieder et al. BIOINFORMATICS
- FLASH: fast length adjustment of short reads to improve genome assemblies
- (2011) T. Magoc et al. BIOINFORMATICS
- The Inter-Valley Soil Comparative Survey: the ecology of Dry Valley edaphic microbial communities
- (2011) Charles K Lee et al. ISME Journal
- Resolving environmental drivers of microbial community structure in Antarctic soils
- (2010) Julie L. Smith et al. ANTARCTIC SCIENCE
- Genomic and Functional Analyses ofRhodococcus equiPhages ReqiPepy6, ReqiPoco6, ReqiPine5, and ReqiDocB7
- (2010) E. J. Summer et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- An integrative study of a meromictic lake ecosystem in Antarctica
- (2010) Federico M Lauro et al. ISME Journal
- Unraveling the viral tapestry (from inside the capsid out)
- (2010) Shawn W Polson et al. ISME Journal
- On the rocks: the microbiology of Antarctic Dry Valley soils
- (2010) S. Craig Cary et al. NATURE REVIEWS MICROBIOLOGY
- Are low temperature habitats hot spots of microbial evolution driven by viruses?
- (2010) Alexandre M. Anesio et al. TRENDS IN MICROBIOLOGY
- Pyrosequencing-Based Assessment of Soil pH as a Predictor of Soil Bacterial Community Structure at the Continental Scale
- (2009) C. L. Lauber et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Laboratory procedures to generate viral metagenomes
- (2009) Rebecca V Thurber et al. Nature Protocols
- Highly specialized microbial diversity in hyper-arid polar desert
- (2009) S. B. Pointing et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- High Diversity of the Viral Community from an Antarctic Lake
- (2009) A. Lopez-Bueno et al. SCIENCE
- High levels of spatial heterogeneity in the biodiversity of soil prokaryotes on Signy Island, Antarctica
- (2009) Chun Wie Chong et al. SOIL BIOLOGY & BIOCHEMISTRY
- Microbial community composition in soils of Northern Victoria Land, Antarctica
- (2008) Thomas D. Niederberger et al. ENVIRONMENTAL MICROBIOLOGY
- Relation between soil classification and bacterial diversity in soils of the Ross Sea region, Antarctica
- (2007) J.M. Aislabie et al. GEODERMA
- Soil distribution in the McMurdo Dry Valleys, Antarctica
- (2007) J.G. Bockheim et al. GEODERMA
- Antarctic soils and soil formation in a changing environment: A review
- (2007) F.C. Ugolini et al. GEODERMA
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