Single-cell and population level viral infection dynamics revealed by phageFISH, a method to visualize intracellular and free viruses

Towards quantitative metagenomics of wild viruses and other ultra-low concentration DNA samples: a rigorous assessment and optimization of the linker amplification method

(2012) Melissa B. Duhaime et al.   ENVIRONMENTAL MICROBIOLOGY

Genomes of marine cyanopodoviruses reveal multiple origins of diversity

(2012) S. J. Labrie et al.   ENVIRONMENTAL MICROBIOLOGY

Roseobacter clade bacteria are abundant in coastal sediments and encode a novel combination of sulfur oxidation genes

(2012) Sabine Lenk et al.   ISME Journal

Superresolution imaging of ribosomes and RNA polymerase in live Escherichia coli cells

(2012) Somenath Bakshi et al.   MOLECULAR MICROBIOLOGY

Crystal ball: Fluorescence in situ hybridization in the age of super-resolution microscopy

(2012) Cristina Moraru et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Ocean viruses: Rigorously evaluating the metagenomic sample-to-sequence pipeline

(2012) Melissa B. Duhaime et al.   VIROLOGY

Contrasting Life Strategies of Viruses that Infect Photo- and Heterotrophic Bacteria, as Revealed by Viral Tagging

(2012) L. Deng et al.   mBio

Denitrification likely catalyzed by endobionts in an allogromiid foraminifer

(2011) Joan M Bernhard et al.   ISME Journal

Detection of single-copy functional genes in prokaryotic cells by two-pass TSA-FISH with polynucleotide probes

(2011) Shuji Kawakami et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Hydrogen is an energy source for hydrothermal vent symbioses

(2011) Jillian M. Petersen et al.   NATURE

Principles of a switch

(2011) Mark Ptashne   Nature Chemical Biology

Single Virus Genomics: A New Tool for Virus Discovery

(2011) Lisa Zeigler Allen et al.   PLoS One

Single-Cell Genomics Reveals Organismal Interactions in Uncultivated Marine Protists

(2011) H. S. Yoon et al.   SCIENCE

Probing Individual Environmental Bacteria for Viruses by Using Microfluidic Digital PCR

(2011) A. D. Tadmor et al.   SCIENCE

Microbial mediation of carbon-cycle feedbacks to climate warming

(2011) Jizhong Zhou et al.   Nature Climate Change

Decision Making at a Subcellular Level Determines the Outcome of Bacteriophage Infection

(2010) Lanying Zeng et al.   CELL

Detection of denitrification genes by in situ rolling circle amplification-fluorescence in situ hybridization to link metabolic potential with identity inside bacterial cells

(2010) Tatsuhiko Hoshino et al.   ENVIRONMENTAL MICROBIOLOGY

GeneFISH - an in situ technique for linking gene presence and cell identity in environmental microorganisms

(2010) Cristina Moraru et al.   ENVIRONMENTAL MICROBIOLOGY

Genomic analysis of oceanic cyanobacterial myoviruses compared with T4-like myoviruses from diverse hosts and environments

(2010) Matthew B. Sullivan et al.   ENVIRONMENTAL MICROBIOLOGY

High-frequency phage-mediated gene transfer in freshwater environments determined at single-cell level

(2010) Takehiko Kenzaka et al.   ISME Journal

A guide to super-resolution fluorescence microscopy

(2010) Lothar Schermelleh et al.   JOURNAL OF CELL BIOLOGY

Intracellular Assembly of Cyanophage Syn5 Proceeds through a Scaffold-Containing Procapsid

(2010) D. A. Raytcheva et al.   JOURNAL OF VIROLOGY

Detection of Single Copy Genes by Two-Pass Tyramide Signal Amplification Fluorescence in situ Hybridization (Two-Pass TSA-FISH) with Single Oligonucleotide Probes

(2010) Shuji Kawakami et al.   MICROBES AND ENVIRONMENTS

Concepts and software for a rational design of polynucleotide probes

(2010) Cristina Moraru et al.   Environmental Microbiology Reports

Roseophage RDJL 1, Infecting the Aerobic Anoxygenic Phototrophic Bacterium Roseobacter denitrificans OCh114

(2009) Y. Zhang et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Carrying photosynthesis genes increases ecological fitness of cyanophagein silico

(2009) Ferdi L. Hellweger   ENVIRONMENTAL MICROBIOLOGY

Prophages in marine bacteria: dangerous molecular time bombs or the key to survival in the seas?

(2008) John H Paul   ISME Journal

Modeling the Fitness Consequences of a Cyanophage-Encoded Photosynthesis Gene

(2008) Jason G. Bragg et al.   PLoS One

The Microbial Engines That Drive Earth's Biogeochemical Cycles

(2008) P. G. Falkowski et al.   SCIENCE