Designing Dietary Recommendations Using System Level Interactomics Analysis and Network-Based Inference

Systems biology approaches to understand the effects of nutrition and promote health

(2016) Lina Badimon et al.   BRITISH JOURNAL OF CLINICAL PHARMACOLOGY

The Emerging Hallmarks of Cancer Metabolism

(2016) Natalya N. Pavlova et al.   Cell Metabolism

Diet, nutrition and cancer: past, present and future

(2016) Susan T. Mayne et al.   Nature Reviews Clinical Oncology

The role of diet and exercise in the transgenerational epigenetic landscape of T2DM

(2016) Romain Barrès et al.   Nature Reviews Endocrinology

Network-based in silico drug efficacy screening

(2016) Emre Guney et al.   Nature Communications

Coffee consumption and the risk of lung cancer: an updated meta-analysis of epidemiological studies

(2015) Y Xie et al.   EUROPEAN JOURNAL OF CLINICAL NUTRITION

Antioxidant compounds, antioxidant activity and phenolic content in peel from three tropical fruits from Yucatan, Mexico

(2015) Víctor M. Moo-Huchin et al.   FOOD CHEMISTRY

Coffee consumption and incidence of lung cancer in the NIH-AARP Diet and Health Study

(2015) Kristin A Guertin et al.   INTERNATIONAL JOURNAL OF EPIDEMIOLOGY

The metabolic regulation of aging

(2015) Toren Finkel   NATURE MEDICINE

BindingDB in 2015: A public database for medicinal chemistry, computational chemistry and systems pharmacology

(2015) Michael K. Gilson et al.   NUCLEIC ACIDS RESEARCH

Uncovering disease-disease relationships through the incomplete interactome

(2015) J. Menche et al.   SCIENCE

A Molecular-Level Landscape of Diet-Gut Microbiome Interactions: Toward Dietary Interventions Targeting Bacterial Genes

(2015) Yueqiong Ni et al.   mBio

Fat, fibre and cancer risk in African Americans and rural Africans

(2015) Stephen J. D. O’Keefe et al.   Nature Communications

Impact of boiling on phytochemicals and antioxidant activity of green vegetables consumed in the Mediterranean diet

(2015) Ana F. Vinha et al.   Food & Function

Developing a Molecular Roadmap of Drug-Food Interactions

(2015) Kasper Jensen et al.   PLoS Computational Biology

Prioritizing Therapeutics for Lung Cancer: An Integrative Meta-analysis of Cancer Gene Signatures and Chemogenomic Data

(2015) Kristen Fortney et al.   PLoS Computational Biology

Exploring mechanisms of diet-colon cancer associations through candidate molecular interaction networks

(2014) David Westergaard et al.   BMC GENOMICS

Novel Drug Candidates for the Treatment of Metastatic Colorectal Cancer through Global Inverse Gene-Expression Profiling

(2014) V. van Noort et al.   CANCER RESEARCH

The Ratio of Macronutrients, Not Caloric Intake, Dictates Cardiometabolic Health, Aging, and Longevity in Ad Libitum-Fed Mice

(2014) Samantha M. Solon-Biet et al.   Cell Metabolism

Diet and the Intestinal Microbiome: Associations, Functions, and Implications for Health and Disease

(2014) Lindsey G. Albenberg et al.   GASTROENTEROLOGY

A community computational challenge to predict the activity of pairs of compounds

(2014) Mukesh Bansal et al.   NATURE BIOTECHNOLOGY

High-fat diet-induced memory impairment in triple-transgenic Alzheimer's disease (3xTgAD) mice is independent of changes in amyloid and tau pathology

(2014) Elysse M. Knight et al.   NEUROBIOLOGY OF AGING

NutriChem: a systems chemical biology resource to explore the medicinal value of plant-based foods

(2014) Kasper Jensen et al.   NUCLEIC ACIDS RESEARCH

Integrated Text Mining and Chemoinformatics Analysis Associates Diet to Health Benefit at Molecular Level

(2014) Kasper Jensen et al.   PLoS Computational Biology

Alcohol consumption as a preventive factor for developing rheumatoid arthritis: a dose-response meta-analysis of prospective studies

(2013) Zhichao Jin et al.   ANNALS OF THE RHEUMATIC DISEASES

Characterization of drug-induced transcriptional modules: towards drug repositioning and functional understanding

(2013) M. Iskar et al.   Molecular Systems Biology

mTOR is a key modulator of ageing and age-related disease

(2013) Simon C. Johnson et al.   NATURE

Diet rapidly and reproducibly alters the human gut microbiome

(2013) Lawrence A. David et al.   NATURE

DrugBank 4.0: shedding new light on drug metabolism

(2013) Vivian Law et al.   NUCLEIC ACIDS RESEARCH

Fructose consumption and cancer

(2013) Ava M. Port et al.   Current Opinion in Endocrinology Diabetes and Obesity

DvD: An R/Cytoscape pipeline for drug repurposing using public repositories of gene expression data

(2012) Clare Pacini et al.   BIOINFORMATICS

Transcriptional data: a new gateway to drug repositioning?

(2012) Francesco Iorio et al.   DRUG DISCOVERY TODAY

Long term alcohol intake and risk of rheumatoid arthritis in women: a population based cohort study

(2012) D. Di Giuseppe et al.   BMJ-British Medical Journal

Using Functional Signatures to Identify Repositioned Drugs for Breast, Myelogenous Leukemia and Prostate Cancer

(2012) Daichi Shigemizu et al.   PLoS Computational Biology

Refined fructose and cancer

(2011) Haibo Liu et al.   EXPERT OPINION ON THERAPEUTIC TARGETS

Caloric restriction

(2011) John R. Speakman et al.   MOLECULAR ASPECTS OF MEDICINE

Pathogenesis of pituitary tumors

(2011) Shlomo Melmed   Nature Reviews Endocrinology

Discovery and Preclinical Validation of Drug Indications Using Compendia of Public Gene Expression Data

(2011) M. Sirota et al.   Science Translational Medicine

Large scale comparison of global gene expression patterns in human and mouse

(2011) Xiangqun Zheng-Bradley et al.   GENOME BIOLOGY

The similarity of gene expression between human and mouse tissues

(2011) Robin D Dowell   GENOME BIOLOGY

Glycine soya diet synergistically enhances the suppressive effect of tamoxifen and inhibits tamoxifen-promoted hepatocarcinogenesis in 7,12-dimethylbenz[α]anthracene-induced rat mammary tumor model

(2010) Rajeev Mishra et al.   FOOD AND CHEMICAL TOXICOLOGY

Large-scale integration of microarray data reveals genes and pathways common to multiple cancer types

(2010) Noor B. Dawany et al.   INTERNATIONAL JOURNAL OF CANCER

Alcohol Consumption and Mortality in Patients With Cardiovascular Disease

(2010) Simona Costanzo et al.   JOURNAL OF THE AMERICAN COLLEGE OF CARDIOLOGY

Divergence of human and mouse brain transcriptome highlights Alzheimer disease pathways

(2010) Jeremy A. Miller et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Discovery of drug mode of action and drug repositioning from transcriptional responses

(2010) F. Iorio et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Alcohol consumption is inversely associated with risk and severity of rheumatoid arthritis

(2010) J. R. Maxwell et al.   RHEUMATOLOGY

Nutritional Systems Biology: Definitions and Approaches

(2009) Gianni Panagiotou et al.   Annual Review of Nutrition

Preparing a Carotenoid Polyphenol-Enriched Extract from the Peel of Persimmon,Diospyros kakiL.f.

(2009) Ryoichi IZUCHI et al.   BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY

Risk of Esophageal Adenocarcinoma and Mortality in Patients With Barrett's Esophagus: A Systematic Review and Meta-analysis

(2009) Marjolein Sikkema et al.   Clinical Gastroenterology and Hepatology

The Antiapoptotic Activity of Melatonin in Neurodegenerative Diseases

(2009) Xin Wang   CNS Neuroscience & Therapeutics

Moderate Alcohol Intake and Cancer Incidence in Women

(2009) N. E. Allen et al.   JNCI-Journal of the National Cancer Institute

Gene-Expression Signatures in Breast Cancer

(2009) Christos Sotiriou et al.   NEW ENGLAND JOURNAL OF MEDICINE

Database resources of the National Center for Biotechnology Information

(2009) E. W. Sayers et al.   NUCLEIC ACIDS RESEARCH

Alcohol consumption is associated with decreased risk of rheumatoid arthritis: results from two Scandinavian case-control studies

(2008) H Kallberg et al.   ANNALS OF THE RHEUMATIC DISEASES

Soy consumption reduces the risk of non-small-cell lung cancers withepidermal growth factor receptormutations among Japanese

(2008) Keitaro Matsuo et al.   CANCER SCIENCE

Dietary Intake of Soy Protein and Tofu in Association With Breast Cancer Risk Based on a Case-Control Study

(2008) Mi Kyung Kim et al.   NUTRITION AND CANCER-AN INTERNATIONAL JOURNAL

The Second World Cancer Research Fund/American Institute for Cancer Research Expert Report. Food, Nutrition, Physical Activity, and the Prevention of Cancer: A Global Perspective

(2008) Martin Wiseman   PROCEEDINGS OF THE NUTRITION SOCIETY