A team of heterochromatin factors collaborates with small RNA pathways to combat repetitive elements and germline stress
出版年份 2017 全文链接
标题
A team of heterochromatin factors collaborates with small RNA pathways to combat repetitive elements and germline stress
作者
关键词
-
出版物
eLife
Volume 6, Issue -, Pages -
出版商
eLife Sciences Organisation, Ltd.
发表日期
2017-03-15
DOI
10.7554/elife.21666
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Buried territories: heterochromatic response to DNA double-strand breaks
- (2016) Yi-Li Feng et al. ACTA BIOCHIMICA ET BIOPHYSICA SINICA
- LINE-1 silencing by retinoblastoma proteins is effected through the nucleosomal and remodeling deacetylase multiprotein complex
- (2016) Diego E. Montoya-Durango et al. BMC CANCER
- Direct interrogation of the role of H3K9 in metazoan heterochromatin function
- (2016) Taylor J.R. Penke et al. GENES & DEVELOPMENT
- Patching Broken DNA: Nucleosome Dynamics and the Repair of DNA Breaks
- (2016) Ozge Gursoy-Yuzugullu et al. JOURNAL OF MOLECULAR BIOLOGY
- Histone H3K9 methylation is dispensable for Caenorhabditis elegans development but suppresses RNA:DNA hybrid-associated repeat instability
- (2016) Peter Zeller et al. NATURE GENETICS
- New Insights into the Regulation of Heterochromatin
- (2016) Jiyong Wang et al. TRENDS IN GENETICS
- The composition and organization of Drosophila heterochromatin are heterogeneous and dynamic
- (2016) Joel M Swenson et al. eLife
- PIWI-Interacting RNA: Its Biogenesis and Functions
- (2015) Yuka W. Iwasaki et al. Annual Review of Biochemistry
- The Developmental Control of Transposable Elements and the Evolution of Higher Species
- (2015) Marc Friedli et al. Annual Review of Cell and Developmental Biology
- The Nrde Pathway Mediates Small-RNA-Directed Histone H3 Lysine 27 Trimethylation in Caenorhabditis elegans
- (2015) Hui Mao et al. CURRENT BIOLOGY
- Maternal piRNAs Are Essential for Germline Development following De Novo Establishment of Endo-siRNAs in Caenorhabditis elegans
- (2015) Bruno F.M. de Albuquerque et al. DEVELOPMENTAL CELL
- The DREAM complex promotes gene body H2A.Z for target repression
- (2015) Isabel Latorre et al. GENES & DEVELOPMENT
- RNA-mediated epigenetic regulation of gene expression
- (2015) Daniel Holoch et al. NATURE REVIEWS GENETICS
- The Dfam database of repetitive DNA families
- (2015) Robert Hubley et al. NUCLEIC ACIDS RESEARCH
- SETDB1, HP1 and SUV39 promote repositioning of 53BP1 to extend resection during homologous recombination in G2 cells
- (2015) Meryem Alagoz et al. NUCLEIC ACIDS RESEARCH
- RNAi and Heterochromatin Assembly
- (2015) Robert Martienssen et al. Cold Spring Harbor Perspectives in Biology
- Constitutive heterochromatin formation and transcription in mammals
- (2015) Nehmé Saksouk et al. Epigenetics & Chromatin
- Complex coding of endogenous siRNA, transcriptional silencing and H3K9 methylation on native targets of germline nuclear RNAi in C. elegans
- (2015) Julie Ni et al. BMC GENOMICS
- piRNAs: from biogenesis to function
- (2014) E.-M. Weick et al. DEVELOPMENT
- Chromatin regulation: How complex does it get?
- (2014) Karin Meier et al. Epigenetics
- Setdb1is required for germline development and silencing of H3K9me3-marked endogenous retroviruses in primordial germ cells
- (2014) Sheng Liu et al. GENES & DEVELOPMENT
- Defining heterochromatin inC. elegansthrough genome-wide analysis of the heterochromatin protein 1 homolog HPL-2
- (2014) Jacob M. Garrigues et al. GENOME RESEARCH
- UpSet: Visualization of Intersecting Sets
- (2014) Alexander Lex et al. IEEE TRANSACTIONS ON VISUALIZATION AND COMPUTER GRAPHICS
- C. elegans CEP-1/p53 and BEC-1 Are Involved in DNA Repair
- (2014) Sandy Hoffman et al. PLoS One
- SPR-5 and MET-2 function cooperatively to reestablish an epigenetic ground state during passage through the germ line
- (2014) Shana C. Kerr et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Differential contribution of HP1 proteins to DNA end resection and homology-directed repair
- (2013) Gaston Soria et al. CELL CYCLE
- RNA interference in the nucleus: roles for small RNAs in transcription, epigenetics and beyond
- (2013) Stephane E. Castel et al. NATURE REVIEWS GENETICS
- HPV 5 and 8 E6 expression reduces ATM protein levels and attenuates LINE-1 retrotransposition
- (2013) Nicholas A. Wallace et al. VIROLOGY
- Distinct roles of KAP1, HP1 and G9a/GLP in silencing of the two-cell-specific retrotransposon MERVL in mouse ES cells
- (2013) Irina A Maksakova et al. Epigenetics & Chromatin
- A Role for the Malignant Brain Tumour (MBT) Domain Protein LIN-61 in DNA Double-Strand Break Repair by Homologous Recombination
- (2013) Nicholas M. Johnson et al. PLoS Genetics
- C. elegans piRNAs Mediate the Genome-wide Surveillance of Germline Transcripts
- (2012) Heng-Chi Lee et al. CELL
- piRNAs Can Trigger a Multigenerational Epigenetic Memory in the Germline of C. elegans
- (2012) Alyson Ashe et al. CELL
- Step-Wise Methylation of Histone H3K9 Positions Heterochromatin at the Nuclear Periphery
- (2012) Benjamin D. Towbin et al. CELL
- piRNAs Initiate an Epigenetic Memory of Nonself RNA in the C. elegans Germline
- (2012) Masaki Shirayama et al. CELL
- NuRD and Pluripotency: A Complex Balancing Act
- (2012) Guang Hu et al. Cell Stem Cell
- Extremely stable Piwi-induced gene silencing inCaenorhabditis elegans
- (2012) Maartje J Luteijn et al. EMBO JOURNAL
- Chromodomain Helicase DNA-binding Protein 4 (CHD4) Regulates Homologous Recombination DNA Repair, and Its Deficiency Sensitizes Cells to Poly(ADP-ribose) Polymerase (PARP) Inhibitor Treatment
- (2012) Mei-Ren Pan et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- A nuclear Argonaute promotes multigenerational epigenetic inheritance and germline immortality
- (2012) Bethany A. Buckley et al. NATURE
- Amplification of siRNA in Caenorhabditis elegans generates a transgenerational sequence-targeted histone H3 lysine 9 methylation footprint
- (2012) Sam Guoping Gu et al. NATURE GENETICS
- Identifying ChIP-seq enrichment using MACS
- (2012) Jianxing Feng et al. Nature Protocols
- Heterochromatin protein 1 homologue Swi6 acts in concert with Ers1 to regulate RNAi-directed heterochromatin assembly
- (2012) A. Hayashi et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Ers1 links HP1 to RNAi
- (2012) M. Rougemaille et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Repression of Germline RNAi Pathways in Somatic Cells by Retinoblastoma Pathway Chromatin Complexes
- (2012) Xiaoyun Wu et al. PLoS Genetics
- Transcriptional Repression of Hox Genes by C. elegans HP1/HPL and H1/HIS-24
- (2012) Maja Studencka et al. PLoS Genetics
- Measuring reproducibility of high-throughput experiments
- (2011) Qunhua Li et al. Annals of Applied Statistics
- VennDiagram: a package for the generation of highly-customizable Venn and Euler diagrams in R
- (2011) Hanbo Chen et al. BMC BIOINFORMATICS
- Double-Strand Breaks in Heterochromatin Move Outside of a Dynamic HP1a Domain to Complete Recombinational Repair
- (2011) Irene Chiolo et al. CELL
- DNA Methylation and SETDB1/H3K9me3 Regulate Predominantly Distinct Sets of Genes, Retroelements, and Chimeric Transcripts in mESCs
- (2011) Mohammad M. Karimi et al. Cell Stem Cell
- synMuv B proteins antagonize germline fate in the intestine and ensure C. elegans survival
- (2011) L. N. Petrella et al. DEVELOPMENT
- Systematic bias in high-throughput sequencing data and its correction by BEADS
- (2011) Ming-Sin Cheung et al. NUCLEIC ACIDS RESEARCH
- Nuclear RNAi maintains heritable gene silencing in Caenorhabditis elegans
- (2011) N. O. Burton et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- H3K9me2/3 Binding of the MBT Domain Protein LIN-61 Is Essential for Caenorhabditis elegans Vulva Development
- (2011) Nora Koester-Eiserfunke et al. PLoS Genetics
- A Pre-mRNA–Associating Factor Links Endogenous siRNAs to Chromatin Regulation
- (2011) Kirk B. Burkhart et al. PLoS Genetics
- Fast and accurate long-read alignment with Burrows–Wheeler transform
- (2010) Heng Li et al. BIOINFORMATICS
- Distributed probing of chromatin structure in vivo reveals pervasive chromatin accessibility for expressed and non-expressed genes during tissue differentiation in C. elegans
- (2010) Ky Sha et al. BMC GENOMICS
- Gene Silencing: Small RNAs Control RNA Polymerase II Elongation
- (2010) Mariano Alló et al. CURRENT BIOLOGY
- Regulation of DNA-damage responses and cell-cycle progression by the chromatin remodelling factor CHD4
- (2010) Sophie E Polo et al. EMBO JOURNAL
- HP1: Heterochromatin binding proteins working the genome
- (2010) Weihua Zeng et al. Epigenetics
- Broad chromosomal domains of histone modification patterns in C. elegans
- (2010) T. Liu et al. GENOME RESEARCH
- The NuRD chromatin–remodeling complex regulates signaling and repair of DNA damage
- (2010) Godelieve Smeenk et al. JOURNAL OF CELL BIOLOGY
- The chromatin-remodeling factor CHD4 coordinates signaling and repair after DNA damage
- (2010) Dorthe Helena Larsen et al. JOURNAL OF CELL BIOLOGY
- Small regulatory RNAs inhibit RNA polymerase II during the elongation phase of transcription
- (2010) Shouhong Guang et al. NATURE
- Different Mi-2 Complexes for Various Developmental Functions in Caenorhabditis elegans
- (2010) Myriam Passannante et al. PLoS One
- Caenorhabditis elegans chromosome arms are anchored to the nuclear membrane via discontinuous association with LEM-2
- (2010) Kohta Ikegami et al. GENOME BIOLOGY
- Differential expression analysis for sequence count data
- (2010) Simon Anders et al. GENOME BIOLOGY
- Recombinational Repair within Heterochromatin Requires ATP-Dependent Chromatin Remodeling
- (2009) Manisha Sinha et al. CELL
- SetDB1 contributes to repression of genes encoding developmental regulators and maintenance of ES cell state
- (2009) S. Bilodeau et al. GENES & DEVELOPMENT
- Eset partners with Oct4 to restrict extraembryonic trophoblast lineage potential in embryonic stem cells
- (2009) P. Yuan et al. GENES & DEVELOPMENT
- Heterochromatin protein 1 is recruited to various types of DNA damage
- (2009) Martijn S. Luijsterburg et al. JOURNAL OF CELL BIOLOGY
- Distinct Argonaute-Mediated 22G-RNA Pathways Direct Genome Surveillance in the C. elegans Germline
- (2009) Weifeng Gu et al. MOLECULAR CELL
- Differential chromatin marking of introns and expressed exons by H3K36me3
- (2009) Paulina Kolasinska-Zwierz et al. NATURE GENETICS
- A C. elegans Piwi, PRG-1, Regulates 21U-RNAs during Spermatogenesis
- (2008) Guilin Wang et al. CURRENT BIOLOGY
- Caenorhabditis elegans POLQ-1 and HEL-308 function in two distinct DNA interstrand cross-link repair pathways
- (2008) Diego M. Muzzini et al. DNA REPAIR
- HP1 Proteins Form Distinct Complexes and Mediate Heterochromatic Gene Silencing by Nonoverlapping Mechanisms
- (2008) Mohammad R. Motamedi et al. MOLECULAR CELL
- Piwi and piRNAs Act Upstream of an Endogenous siRNA Pathway to Suppress Tc3 Transposon Mobility in the Caenorhabditis elegans Germline
- (2008) Partha P. Das et al. MOLECULAR CELL
- PRG-1 and 21U-RNAs Interact to Form the piRNA Complex Required for Fertility in C. elegans
- (2008) Pedro J. Batista et al. MOLECULAR CELL
- Imaging individual mRNA molecules using multiple singly labeled probes
- (2008) Arjun Raj et al. NATURE METHODS
- An Argonaute Transports siRNAs from the Cytoplasm to the Nucleus
- (2008) S. Guang et al. SCIENCE
Create your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create NowAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started