Genome-wide association mapping for root cone angle in rice

Genome-wide association analysis for heat tolerance at flowering detected a large set of genes involved in adaptation to thermal and other stresses

(2017) Tanguy Lafarge et al.   PLoS One

CENH3-GFP: a visual marker for gametophytic and somatic ploidy determination in Arabidopsis thaliana

(2016) Nico De Storme et al.   BMC PLANT BIOLOGY

Regulation of polar auxin transport by protein and lipid kinases

(2016) Laia Armengot et al.   JOURNAL OF EXPERIMENTAL BOTANY

The phenome analysis of mutant alleles in Leucine-Rich Repeat Receptor-Like Kinase genes in rice reveals new potential targets for stress tolerant cereals

(2016) Anne Dievart et al.   PLANT SCIENCE

Open access resources for genome-wide association mapping in rice

(2016) Susan R. McCouch et al.   Nature Communications

Genetic improvement for root growth angle to enhance crop production

(2015) Yusaku Uga et al.   BREEDING SCIENCE

Quantitative trait locus mapping of deep rooting by linkage and association analysis in rice

(2015) Qiaojun Lou et al.   JOURNAL OF EXPERIMENTAL BOTANY

SNP-Seek database of SNPs derived from 3000 rice genomes

(2014) Nickolai Alexandrov et al.   NUCLEIC ACIDS RESEARCH

CYTOKININ OXIDASE/DEHYDROGENASE4 Integrates Cytokinin and Auxin Signaling to Control Rice Crown Root Formation

(2014) S. Gao et al.   PLANT PHYSIOLOGY

The roots of future rice harvests

(2014) Nourollah Ahmadi et al.   Rice

Control of root system architecture by DEEPER ROOTING 1 increases rice yield under drought conditions

(2013) Yusaku Uga et al.   NATURE GENETICS

The advantages and limitations of trait analysis with GWAS: a review

(2013) Arthur Korte et al.   Plant Methods

Microarray Analyses and Comparisons of Upper or Lower Flanks of Rice Shoot Base Preceding Gravitropic Bending

(2013) Liwei Hu et al.   PLoS One

Genome-Wide Association Mapping of Root Traits in a Japonica Rice Panel

(2013) Brigitte Courtois et al.   PLoS One

A major QTL controlling deep rooting on rice chromosome 4

(2013) Yusaku Uga et al.   Scientific Reports

Root traits for infertile soils

(2013) Philip J. White et al.   Frontiers in Plant Science

Genetic control of nodal root angle in sorghum and its implications on water extraction

(2012) Vijaya Singh et al.   EUROPEAN JOURNAL OF AGRONOMY

Genetic and Physiological Analysis of a Novel Type of Interspecific Hybrid Weakness in Rice

(2012) Chen Chen et al.   Molecular Plant

Rare and common variants: twenty arguments

(2012) Greg Gibson   NATURE REVIEWS GENETICS

Distinctive expression patterns and roles of the miRNA393/TIR1 homolog module in regulating flag leaf inclination and primary and crown root growth in rice (Oryza sativa)

(2012) Hongwu Bian et al.   NEW PHYTOLOGIST

Transcript profiling of crown rootless1 mutant stem base reveals new elements associated with crown root development in rice

(2011) Yoan Coudert et al.   BMC GENOMICS

Root biology and genetic improvement for drought avoidance in rice

(2011) Veeresh R.P. Gowda et al.   FIELD CROPS RESEARCH

Multiple testing corrections for imputed SNPs

(2011) Xiaoyi Gao   GENETIC EPIDEMIOLOGY

Dro1, a major QTL involved in deep rooting of rice under upland field conditions

(2011) Yusaku Uga et al.   JOURNAL OF EXPERIMENTAL BOTANY

Comprehensive Sequence and Whole-Life-Cycle Expression Profile Analysis of the Phosphate Transporter Gene Family in Rice

(2011) Fang Liu et al.   Molecular Plant

Genome-wide association study of leaf architecture in the maize nested association mapping population

(2011) Feng Tian et al.   NATURE GENETICS

Three-Dimensional Root Phenotyping with a Novel Imaging and Software Platform

(2011) R. T. Clark et al.   PLANT PHYSIOLOGY

A Robust, Simple Genotyping-by-Sequencing (GBS) Approach for High Diversity Species

(2011) Robert J. Elshire et al.   PLoS One

Identification of qSOR1, a major rice QTL involved in soil-surface rooting in paddy fields

(2011) Yusaku Uga et al.   THEORETICAL AND APPLIED GENETICS

Genome-wide association mapping reveals a rich genetic architecture of complex traits in Oryza sativa

(2011) Keyan Zhao et al.   Nature Communications

Genome-wide association studies of 14 agronomic traits in rice landraces

(2010) Xuehui Huang et al.   NATURE GENETICS

Identification of a novel mitochondrial protein, short postembryonic roots 1 (SPR1), involved in root development and iron homeostasis in Oryza sativa

(2010) Liqiang Jia et al.   NEW PHYTOLOGIST

Shovelomics: high throughput phenotyping of maize (Zea mays L.) root architecture in the field

(2010) Samuel Trachsel et al.   PLANT AND SOIL

Variation in root morphology and anatomy among accessions of cultivated rice (Oryza sativa L.) with different genetic backgrounds

(2009) Yusaku Uga et al.   BREEDING SCIENCE

Auxin-Responsive Genes AIR12 Code for a New Family of Plasma Membrane b-Type Cytochromes Specific to Flowering Plants

(2009) V. Preger et al.   PLANT PHYSIOLOGY

Mapping of quantitative trait loci for seminal root morphology and gravitropic response in rice

(2008) Gareth J. Norton et al.   EUPHYTICA

Tissue and Cell-Specific Localization of Rice Aquaporins and Their Water Transport Activities

(2007) J. Sakurai et al.   PLANT AND CELL PHYSIOLOGY