Editor’s Highlight: Organophosphate Diazinon Altered Quorum Sensing, Cell Motility, Stress Response, and Carbohydrate Metabolism of Gut Microbiome

De-novo transcriptome assembly for gene identification, analysis, annotation, and molecular marker discovery in Onobrychis viciifolia

(2016) Marina Mora-Ortiz et al.   BMC GENOMICS

Gut to brain interaction in Autism Spectrum Disorders: a randomized controlled trial on the role of probiotics on clinical, biochemical and neurophysiological parameters

(2016) Elisa Santocchi et al.   BMC Psychiatry

Sex-Specific Effects of Arsenic Exposure on the Trajectory and Function of the Gut Microbiome

(2016) Liang Chi et al.   CHEMICAL RESEARCH IN TOXICOLOGY

Identification of interleukin genes in Pogona vitticeps using a de novo transcriptome assembly from RNA-seq data

(2016) Alexandra Livernois et al.   IMMUNOGENETICS

Serotonin Activates Bacterial Quorum Sensing and Enhances the Virulence of Pseudomonas aeruginosa in the Host

(2016) Leslie D. Knecht et al.   EBioMedicine

Subchronic Exposure of Mice to Cadmium Perturbs Their Hepatic Energy Metabolism and Gut Microbiome

(2015) Songbin Zhang et al.   CHEMICAL RESEARCH IN TOXICOLOGY

Diazinon, an organophosphate pesticide, induces oxidative stress and genotoxicity in cells deriving from large intestine

(2015) Manel Boussabbeh et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

Incidence of solid tumours among pesticide applicators exposed to the organophosphate insecticide diazinon in the Agricultural Health Study: an updated analysis

(2015) Rena R Jones et al.   OCCUPATIONAL AND ENVIRONMENTAL MEDICINE

Association of HMOX1 and NQO1 Polymorphisms with Metabolic Syndrome Components

(2015) Angélica Martínez-Hernández et al.   PLoS One

Quorum sensing positively regulates flagellar motility in pathogenicVibrio harveyi

(2014) Qian Yang et al.   ENVIRONMENTAL MICROBIOLOGY

Role of the Streptococcus mutans CRISPR-Cas Systems in Immunity and Cell Physiology

(2014) M. A. Serbanescu et al.   JOURNAL OF BACTERIOLOGY

Unravelling the structural and mechanistic basis of CRISPR–Cas systems

(2014) John van der Oost et al.   NATURE REVIEWS MICROBIOLOGY

Expanded microbial genome coverage and improved protein family annotation in the COG database

(2014) Michael Y. Galperin et al.   NUCLEIC ACIDS RESEARCH

Xenobiotics Shape the Physiology and Gene Expression of the Active Human Gut Microbiome

(2013) Corinne Ferrier Maurice et al.   CELL

De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis

(2013) Brian J Haas et al.   Nature Protocols

A review of experimental evidence linking neurotoxic organophosphorus compounds and inflammation

(2012) Christopher N. Banks et al.   NEUROTOXICOLOGY

Host-Gut Microbiota Metabolic Interactions

(2012) J. K. Nicholson et al.   SCIENCE

The role of oxidative stress in diazinon-induced tissues toxicity in Wistar and Norway rats

(2012) Mahvash Jafari et al.   TOXICOLOGY MECHANISMS AND METHODS

Memory of viral infections by CRISPR-Cas adaptive immune systems: Acquisition of new information

(2012) Peter C. Fineran et al.   VIROLOGY

Molecular memory of prior infections activates the CRISPR/Cas adaptive bacterial immunity system

(2012) Kirill A. Datsenko et al.   Nature Communications

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

(2011) Bo Li et al.   BMC BIOINFORMATICS

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

Differential acetylcholinesterase inhibition of chlorpyrifos, diazinon and parathion in larval zebrafish

(2011) Jerry Yen et al.   NEUROTOXICOLOGY AND TERATOLOGY

Metatranscriptomic Approach to Analyze the Functional Human Gut Microbiota

(2011) María José Gosalbes et al.   PLoS One

The N-Terminal Domain of Aliivibrio fischeri LuxR Is a Target of the GroEL Chaperonin

(2010) I. V. Manukhov et al.   JOURNAL OF BACTERIOLOGY

A dual function of the CRISPR-Cas system in bacterial antivirus immunity and DNA repair

(2010) Mohan Babu et al.   MOLECULAR MICROBIOLOGY

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

(2010) Cole Trapnell et al.   NATURE BIOTECHNOLOGY

Induction of heat shock proteins for protection against oxidative stress

(2009) Bernadett Kalmar et al.   ADVANCED DRUG DELIVERY REVIEWS

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Identification, Quantification, and Determination of the Absolute Configuration of the Bacterial Quorum-Sensing Signal Autoinducer-2 by Gas Chromatography-Mass Spectrometry

(2009) Verena Thiel et al.   CHEMBIOCHEM

The bacterial LexA transcriptional repressor

(2008) M. Butala et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

Interaction of Diazinon with DNA and the Protective Role of Selenium in DNA Damage

(2008) Soheila Kashanian et al.   DNA AND CELL BIOLOGY