Recent advances in optical-based and force-based single nucleic acid imaging

Probing the mechanical properties, conformational changes, and interactions of nucleic acids with magnetic tweezers

(2017) Franziska Kriegel et al.   JOURNAL OF STRUCTURAL BIOLOGY

Targeted DNA sequencing and in situ mutation analysis using mobile phone microscopy

(2017) Malte Kühnemund et al.   Nature Communications

Ultrahigh-resolution imaging of water networks by atomic force microscopy

(2017) Akitoshi Shiotari et al.   Nature Communications

The dynamic interactions between chemotherapy drugs and plasmid DNA investigated by atomic force microscopy

(2017) Mi Li et al.   Science China-Materials

Fluorescent Biosensors Based on Single-Molecule Counting

(2016) Fei Ma et al.   ACCOUNTS OF CHEMICAL RESEARCH

Live Cell MicroRNA Imaging Using Exonuclease III-Aided Recycling Amplification Based on Aggregation-Induced Emission Luminogens

(2016) Xuehong Min et al.   ACS Applied Materials & Interfaces

Single-Molecule Imaging of Iron-Phthalocyanine-Catalyzed Oxygen Reduction Reaction by in Situ Scanning Tunneling Microscopy

(2016) Jing-Ying Gu et al.   ACS Nano

Direct and precise length measurement of single, stretched DNA fragments by dynamic molecular combing and STED nanoscopy

(2016) Namdoo Kim et al.   ANALYTICAL AND BIOANALYTICAL CHEMISTRY

Nucleic Acid–Based Nanodevices in Biological Imaging

(2016) Kasturi Chakraborty et al.   Annual Review of Biochemistry

Flow of DNA in micro/nanofluidics: From fundamentals to applications

(2016) Lea Rems et al.   Biomicrofluidics

Mobile Phone-Based Microscopy, Sensing, and Diagnostics

(2016) Jose C. Contreras-Naranjo et al.   IEEE JOURNAL OF SELECTED TOPICS IN QUANTUM ELECTRONICS

Imaging and force probing RNA by atomic force microscopy

(2016) Peter Schön   METHODS

High resolution atomic force microscopy of double-stranded RNA

(2016) Pablo Ares et al.   Nanoscale

Removing orientation-induced localization biases in single-molecule microscopy using a broadband metasurface mask

(2016) Mikael P. Backlund et al.   Nature Photonics

Non-fluorescent schemes for single-molecule detection, imaging and spectroscopy

(2016) Jaime Ortega Arroyo et al.   Nature Photonics

Enhanced DNA imaging using super-resolution microscopy and simultaneous single-molecule orientation measurements

(2016) Adam S. Backer et al.   Optica

Single Molecule with Dual Function on Nanogold: Biofunctionalized Construct for In Vivo Photoacoustic Imaging and SERS Biosensing

(2015) U. S. Dinish et al.   ADVANCED FUNCTIONAL MATERIALS

DNA visualization in single molecule studies carried out with optical tweezers: Covalent versus non-covalent attachment of fluorophores

(2015) Sandy Suei et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Superresolution imaging of single DNA molecules using stochastic photoblinking of minor groove and intercalating dyes

(2015) Helen Miller et al.   METHODS

Simultaneous Single-Molecule Force and Fluorescence Sampling of DNA Nanostructure Conformations Using Magnetic Tweezers

(2015) Felix E. Kemmerich et al.   NANO LETTERS

Automation of a single-DNA molecule stretching device

(2015) Kristian Tølbøl Sørensen et al.   REVIEW OF SCIENTIFIC INSTRUMENTS

Single-Molecule Imaging of Dynamic Motions of Biomolecules in DNA Origami Nanostructures Using High-Speed Atomic Force Microscopy

(2014) Masayuki Endo et al.   ACCOUNTS OF CHEMICAL RESEARCH

Imaging and Sizing of Single DNA Molecules on a Mobile Phone

(2014) Qingshan Wei et al.   ACS Nano

Plasmonic Imaging and Detection of Single DNA Molecules

(2014) Hui Yu et al.   ACS Nano

Mechanical Operation and Intersubunit Coordination of Ring-Shaped Molecular Motors: Insights from Single-Molecule Studies

(2014) Shixin Liu et al.   BIOPHYSICAL JOURNAL

Introduction to Single Molecule Imaging and Mechanics: Seeing and Touching Molecules One at a Time

(2014) Nils G. Walter et al.   CHEMICAL REVIEWS

DNA Dynamics and Single-Molecule Biology

(2014) Daniel Duzdevich et al.   CHEMICAL REVIEWS

Nanoscale optical probes for cellular imaging

(2014) Hui Xu et al.   CHEMICAL SOCIETY REVIEWS

Combining single-molecule manipulation and single-molecule detection

(2014) Juan Carlos Cordova et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

Simple method of DNA stretching on glass substrate for fluorescence imaging and spectroscopy

(2014) Guru P. Neupane et al.   JOURNAL OF BIOMEDICAL OPTICS

Single-Molecule Reconstruction of Oligonucleotide Secondary Structure by Atomic Force Microscopy

(2014) Alice Pyne et al.   Small

Trehalose facilitates DNA melting: a single-molecule optical tweezers study

(2014) Sergey Bezrukavnikov et al.   Soft Matter

Single-Molecule Fluorescence Imaging in Living Cells

(2013) Tie Xia et al.   Annual Review of Physical Chemistry

Maximizing information content of single-molecule FRET experiments: multi-color FRET and FRET combined with force or torque

(2013) Sungchul Hohng et al.   CHEMICAL SOCIETY REVIEWS

Single-molecule photophysics, from cryogenic to ambient conditions

(2013) Bolesław Kozankiewicz et al.   CHEMICAL SOCIETY REVIEWS

Time-Lapse AFM Imaging of DNA Conformational Changes Induced by Daunorubicin

(2013) Livan Alonso-Sarduy et al.   NANO LETTERS

Recent Advances in Magnetic Tweezers

(2012) Iwijn De Vlaminck et al.   Annual Review of Biophysics

Photophysics of Fluorescent Probes for Single-Molecule Biophysics and Super-Resolution Imaging

(2012) Taekjip Ha et al.   Annual Review of Physical Chemistry

Mechanical Identities of RNA and DNA Double Helices Unveiled at the Single-Molecule Level

(2012) Elías Herrero-Galán et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Multicolor Super-Resolution DNA Imaging for Genetic Analysis

(2012) Murat Baday et al.   NANO LETTERS

Mechanical Properties of High-G⋅C Content DNA with A-Type Base-Stacking

(2011) Silvia Hormeño et al.   BIOPHYSICAL JOURNAL

Condensation Prevails over B-A Transition in the Structure of DNA at Low Humidity

(2011) Silvia Hormeño et al.   BIOPHYSICAL JOURNAL

Mechanical stability of low-humidity single DNA molecules

(2011) Silvia Hormeño et al.   BIOPOLYMERS

Revisiting the Central Dogma One Molecule at a Time

(2011) Carlos Bustamante et al.   CELL

Quantifying how DNA stretches, melts and changes twist under tension

(2011) Peter Gross et al.   Nature Physics

Moving into the cell: single-molecule studies of molecular motors in complex environments

(2011) Claudia Veigel et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Combining optical trapping, fluorescence microscopy and micro-fluidics for single molecule studies of DNA–protein interactions

(2011) Andrea Candelli et al.   PHYSICAL CHEMISTRY CHEMICAL PHYSICS

Chemical and structural biology of nucleic acids and protein-nucleic acid complexes for novel drug discovery

(2011) JianHua Gan et al.   Science China-Chemistry

Single-molecule imaging reveals mechanisms of protein disruption by a DNA translocase

(2010) Ilya J. Finkelstein et al.   NATURE

Single-molecule force spectroscopy: optical tweezers, magnetic tweezers and atomic force microscopy

(2008) Keir C Neuman et al.   NATURE METHODS